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3.12.2: 2018-04-16
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Hierarchy For All Packages
Package Hierarchies:
net.sf.basedb.clients.jobagent
,
net.sf.basedb.clients.jobagent.executors
,
net.sf.basedb.clients.jobagent.handlers
,
net.sf.basedb.clients.jobagent.slotmanager
,
net.sf.basedb.clients.web
,
net.sf.basedb.clients.web.extensions
,
net.sf.basedb.clients.web.extensions.edit
,
net.sf.basedb.clients.web.extensions.list
,
net.sf.basedb.clients.web.extensions.login
,
net.sf.basedb.clients.web.extensions.menu
,
net.sf.basedb.clients.web.extensions.plot
,
net.sf.basedb.clients.web.extensions.renderer
,
net.sf.basedb.clients.web.extensions.section
,
net.sf.basedb.clients.web.extensions.service
,
net.sf.basedb.clients.web.extensions.skin
,
net.sf.basedb.clients.web.extensions.startpage
,
net.sf.basedb.clients.web.extensions.tabcontrol
,
net.sf.basedb.clients.web.extensions.toolbar
,
net.sf.basedb.clients.web.fileupload
,
net.sf.basedb.clients.web.formatter
,
net.sf.basedb.clients.web.plugins
,
net.sf.basedb.clients.web.resources
,
net.sf.basedb.clients.web.servlet
,
net.sf.basedb.clients.web.taglib
,
net.sf.basedb.clients.web.taglib.extensions
,
net.sf.basedb.clients.web.taglib.menu
,
net.sf.basedb.clients.web.taglib.path
,
net.sf.basedb.clients.web.taglib.tab
,
net.sf.basedb.clients.web.taglib.table
,
net.sf.basedb.clients.web.util
,
net.sf.basedb.core
,
net.sf.basedb.core.authentication
,
net.sf.basedb.core.data
,
net.sf.basedb.core.data.annotations
,
net.sf.basedb.core.data.keyring
,
net.sf.basedb.core.dbengine
,
net.sf.basedb.core.hibernate
,
net.sf.basedb.core.log
,
net.sf.basedb.core.log.db
,
net.sf.basedb.core.migrate
,
net.sf.basedb.core.migrate.postgres
,
net.sf.basedb.core.plugin
,
net.sf.basedb.core.query
,
net.sf.basedb.core.signal
,
net.sf.basedb.core.snapshot
,
net.sf.basedb.plugins
,
net.sf.basedb.plugins.batchimport
,
net.sf.basedb.plugins.executor
,
net.sf.basedb.plugins.gtf
,
net.sf.basedb.plugins.util
,
net.sf.basedb.util
,
net.sf.basedb.util.affymetrix
,
net.sf.basedb.util.annotations
,
net.sf.basedb.util.basefile
,
net.sf.basedb.util.bcrypt
,
net.sf.basedb.util.bfs
,
net.sf.basedb.util.biomaterial
,
net.sf.basedb.util.collections
,
net.sf.basedb.util.encode
,
net.sf.basedb.util.error
,
net.sf.basedb.util.export
,
net.sf.basedb.util.export.spotdata
,
net.sf.basedb.util.extensions
,
net.sf.basedb.util.extensions.debug
,
net.sf.basedb.util.extensions.events
,
net.sf.basedb.util.extensions.manager
,
net.sf.basedb.util.extensions.manager.filter
,
net.sf.basedb.util.extensions.manager.processor
,
net.sf.basedb.util.extensions.xml
,
net.sf.basedb.util.fileset
,
net.sf.basedb.util.filter
,
net.sf.basedb.util.formatter
,
net.sf.basedb.util.fuzzy
,
net.sf.basedb.util.gtf
,
net.sf.basedb.util.importer
,
net.sf.basedb.util.importer.spotdata
,
net.sf.basedb.util.jep
,
net.sf.basedb.util.jep.convert
,
net.sf.basedb.util.jobagent
,
net.sf.basedb.util.json
,
net.sf.basedb.util.listable
,
net.sf.basedb.util.ma
,
net.sf.basedb.util.overview
,
net.sf.basedb.util.overview.cache
,
net.sf.basedb.util.overview.extensions
,
net.sf.basedb.util.overview.filter
,
net.sf.basedb.util.overview.loader
,
net.sf.basedb.util.overview.node
,
net.sf.basedb.util.overview.validator
,
net.sf.basedb.util.parser
,
net.sf.basedb.util.plot
,
net.sf.basedb.util.query
,
net.sf.basedb.util.resources
,
net.sf.basedb.util.ssl
,
net.sf.basedb.util.timer
,
net.sf.basedb.util.transform
,
net.sf.basedb.util.units
,
net.sf.basedb.util.uri
,
net.sf.basedb.util.uri.http
,
net.sf.basedb.util.zip
Class Hierarchy
java.lang.Object
net.sf.basedb.util.extensions.
AboutBean
(implements net.sf.basedb.core.plugin.
About
, net.sf.basedb.util.extensions.
ExtendedAbout
)
net.sf.basedb.core.plugin.
AboutImpl
(implements net.sf.basedb.core.plugin.
About
)
net.sf.basedb.core.query.
AbsExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.
AbstractBatcher
(implements net.sf.basedb.core.
Batcher
)
net.sf.basedb.core.
AnnotationBatcher
net.sf.basedb.core.
BasicBatcher
<D> (implements net.sf.basedb.core.
AccessControlled
)
net.sf.basedb.core.
FeatureBatcher
net.sf.basedb.core.
RawDataBatcher
net.sf.basedb.core.
ReporterBatcher
net.sf.basedb.core.
FilterBatcher
net.sf.basedb.core.
MappingBatcher
net.sf.basedb.core.
PositionBatcher
net.sf.basedb.core.
PositionExtraValueBatcher
<I>
net.sf.basedb.core.
ReporterCloneBatcher
net.sf.basedb.core.
SpotBatcher
net.sf.basedb.core.
SpotExtraValueBatcher
<I>
net.sf.basedb.util.export.spotdata.
AbstractBioAssaySetExporter
net.sf.basedb.util.export.spotdata.
BaseFileExporter
net.sf.basedb.util.export.spotdata.
MatrixBaseFileExporter
net.sf.basedb.util.export.spotdata.
SerialBaseFileExporter
net.sf.basedb.util.export.spotdata.
BfsExporter
net.sf.basedb.util.export.spotdata.
MatrixBfsExporter
net.sf.basedb.util.export.spotdata.
SerialBfsExporter
java.util.AbstractCollection<E> (implements java.util.Collection<E>)
java.util.AbstractList<E> (implements java.util.List<E>)
java.util.ArrayList<E> (implements java.lang.Cloneable, java.util.List<E>, java.util.RandomAccess, java.io.Serializable)
net.sf.basedb.core.
UnmodifiableResultList
<T> (implements net.sf.basedb.core.query.
ResultList
<I>)
net.sf.basedb.clients.jobagent.handlers.
AbstractCustomRequestHandler
(implements net.sf.basedb.clients.jobagent.handlers.
CustomRequestHandler
)
org.jfree.data.general.
AbstractDataset
(implements java.lang.Cloneable, org.jfree.data.general.
Dataset
, java.io.ObjectInputValidation, java.io.Serializable)
org.jfree.data.general.
AbstractSeriesDataset
(implements java.io.Serializable, org.jfree.data.general.
SeriesChangeListener
, org.jfree.data.general.
SeriesDataset
)
net.sf.basedb.util.plot.
HistogramPlot.HistogramDataset
(implements org.jfree.data.xy.
IntervalXYDataset
)
net.sf.basedb.util.bfs.
AbstractDataWriterFactory
<T> (implements net.sf.basedb.util.bfs.
DataWriterFactory
<T>)
net.sf.basedb.util.bfs.
GenericBaseDataWriterFactory
<T>
net.sf.basedb.util.bfs.
GenericDiskDataWriterFactory
<T>
net.sf.basedb.core.dbengine.
AbstractDbEngine
(implements net.sf.basedb.core.dbengine.
DbEngine
)
net.sf.basedb.core.dbengine.
DefaultDbEngine
net.sf.basedb.core.dbengine.
MySQLEngine
(implements net.sf.basedb.core.dbengine.
DbEngine
)
net.sf.basedb.core.dbengine.
PostgresDbEngine
(implements net.sf.basedb.core.dbengine.
DbEngine
)
net.sf.basedb.util.export.spotdata.
AbstractFieldConverter
(implements net.sf.basedb.util.export.spotdata.
ExportableFieldConverter
)
net.sf.basedb.util.export.spotdata.
StandardFieldConverter
net.sf.basedb.util.export.spotdata.
AdvancedFieldConverter
net.sf.basedb.util.export.spotdata.
Base1FieldConverter
net.sf.basedb.util.bfs.
AbstractFilenameGenerator
<T> (implements net.sf.basedb.util.bfs.
FilenameGenerator
<T>)
net.sf.basedb.util.bfs.
SuggestedFilenameGenerator
net.sf.basedb.util.jep.convert.
AbstractJepConversionFunction
<T> (implements net.sf.basedb.util.jep.convert.
JepConversionFunction
<T>)
net.sf.basedb.util.jep.convert.
AbsConverter
net.sf.basedb.util.jep.convert.
AddConverter
net.sf.basedb.util.jep.convert.
AndConverter
net.sf.basedb.util.jep.convert.
ASTConstantConverter
net.sf.basedb.util.jep.convert.
ASTFunNodeConverter
net.sf.basedb.util.jep.convert.
ASTVarNodeConverter
net.sf.basedb.util.jep.convert.
DivideConverter
net.sf.basedb.util.jep.convert.
EqualsConverter
net.sf.basedb.util.jep.convert.
ExpConverter
net.sf.basedb.util.jep.convert.
FloatConverter
net.sf.basedb.util.jep.convert.
GreaterConverter
net.sf.basedb.util.jep.convert.
GreaterEqualsConverter
net.sf.basedb.util.jep.convert.
IfConverter
net.sf.basedb.util.jep.convert.
IntegerConverter
net.sf.basedb.util.jep.convert.
LessConverter
net.sf.basedb.util.jep.convert.
LessEqualsConverter
net.sf.basedb.util.jep.convert.
LogarithmConverter
net.sf.basedb.util.jep.convert.
MultiplyConverter
net.sf.basedb.util.jep.convert.
NaturalLogarithmConverter
net.sf.basedb.util.jep.convert.
NotConverter
net.sf.basedb.util.jep.convert.
NotEqualsConverter
net.sf.basedb.util.jep.convert.
OrConverter
net.sf.basedb.util.jep.convert.
SquareRootConverter
net.sf.basedb.util.jep.convert.
StringConverter
net.sf.basedb.util.jep.convert.
SubtractConverter
net.sf.basedb.util.jep.convert.
UMinusConverter
net.sf.basedb.clients.web.extensions.
AbstractJspFactory
(implements net.sf.basedb.clients.web.extensions.
DynamicActionAttributes
)
net.sf.basedb.clients.web.extensions.
AbstractJspActionFactory
<A> (implements net.sf.basedb.util.extensions.
ActionFactory
<A>)
net.sf.basedb.clients.web.extensions.edit.
DebugOnSaveActionFactory
net.sf.basedb.clients.web.extensions.toolbar.
FixedButtonFactory
(implements net.sf.basedb.clients.web.extensions.toolbar.
ButtonAction
)
net.sf.basedb.clients.web.extensions.menu.
FixedMenuItemFactory
(implements net.sf.basedb.clients.web.extensions.menu.
MenuItemAction
)
net.sf.basedb.clients.web.extensions.skin.
FixedSkinActionFactory
net.sf.basedb.clients.web.extensions.startpage.
FixedStartPageFactory
(implements net.sf.basedb.clients.web.extensions.startpage.
StartPageAction
)
net.sf.basedb.clients.web.extensions.tabcontrol.
FixedTabFactory
(implements net.sf.basedb.clients.web.extensions.tabcontrol.
TabAction
)
net.sf.basedb.clients.web.extensions.section.
IncludeContentSectionFactory
net.sf.basedb.clients.web.extensions.tabcontrol.
IncludeContentTabFactory
net.sf.basedb.clients.web.extensions.plot.
MAPlotFactory
net.sf.basedb.clients.web.extensions.toolbar.
PermissionButtonFactory
net.sf.basedb.clients.web.extensions.menu.
PermissionMenuItemFactory
net.sf.basedb.clients.web.extensions.list.
PropertyPathActionFactory
<I,V>
net.sf.basedb.clients.web.extensions.
AbstractJspRendererFactory
<A> (implements net.sf.basedb.util.extensions.
RendererFactory
<A>)
net.sf.basedb.clients.web.extensions.toolbar.
CompactButtonRendererFactory
net.sf.basedb.clients.web.extensions.toolbar.
ToolbarButtonRendererFactory
net.sf.basedb.clients.web.extensions.list.
AbstractListColumnBean
<I,V> (implements net.sf.basedb.clients.web.extensions.list.
ListColumnAction
<I,V>)
net.sf.basedb.clients.web.extensions.list.
PropertyPathActionFactory.PropertyPathAction
<I,V>
net.sf.basedb.util.overview.loader.
AbstractNodeLoader
<I> (implements net.sf.basedb.util.overview.loader.
NodeLoader
<I>)
net.sf.basedb.util.overview.loader.
BasicItemNodeLoader
<I>
net.sf.basedb.util.overview.loader.
AnnotationLoader
net.sf.basedb.util.overview.loader.
AnyToAnyLoader
net.sf.basedb.util.overview.loader.
ArrayBatchLoader
net.sf.basedb.util.overview.loader.
ArrayDesignLoader
net.sf.basedb.util.overview.loader.
ArraySlideLoader
net.sf.basedb.util.overview.loader.
BioPlateEventLoader
net.sf.basedb.util.overview.loader.
BioPlateLoader
net.sf.basedb.util.overview.loader.
BioSourceLoader
net.sf.basedb.util.overview.loader.
BioWellLoader
net.sf.basedb.util.overview.loader.
DataFileLoader
net.sf.basedb.util.overview.loader.
DerivedBioAssayLoader
net.sf.basedb.util.overview.loader.
ExperimentalFactorLoader
net.sf.basedb.util.overview.loader.
ExperimentLoader
net.sf.basedb.util.overview.loader.
ExtractLoader
net.sf.basedb.util.overview.loader.
HardwareLoader
net.sf.basedb.util.overview.loader.
ItemListLoader
net.sf.basedb.util.overview.loader.
KitLoader
net.sf.basedb.util.overview.loader.
PhysicalBioAssayLoader
net.sf.basedb.util.overview.loader.
PlatformLoader
net.sf.basedb.util.overview.loader.
ProtocolLoader
net.sf.basedb.util.overview.loader.
ProtocolParameterLoader
net.sf.basedb.util.overview.loader.
RawBioAssayLoader
net.sf.basedb.util.overview.loader.
RootRawBioAssayLoader
net.sf.basedb.util.overview.loader.
SampleLoader
net.sf.basedb.util.overview.loader.
SoftwareLoader
net.sf.basedb.util.overview.loader.
TagLoader
net.sf.basedb.clients.web.extensions.edit.
AbstractOnSaveAction
(implements net.sf.basedb.clients.web.extensions.edit.
OnSaveAction
)
net.sf.basedb.clients.web.extensions.edit.
DebugOnSaveActionFactory.DebugOnSaveAction
net.sf.basedb.core.plugin.
AbstractPlugin
(implements net.sf.basedb.core.plugin.
Plugin
)
net.sf.basedb.core.plugin.
AbstractAnalysisPlugin
net.sf.basedb.plugins.
Base1PluginExecuter
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.executor.
ExternalProgramExecutor
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
FormulaFilter
(implements net.sf.basedb.core.plugin.
AnalysisFilterPlugin
, net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
JepExtraValueCalculator
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
JepIntensityTransformer
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
LowessNormalization
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
ManualDerivedBioAssayCreator
(implements net.sf.basedb.core.plugin.
AnnotationSetterPlugin
, net.sf.basedb.core.plugin.
InteractivePlugin
)
net.sf.basedb.plugins.
ManualTransformCreator
(implements net.sf.basedb.core.plugin.
AnnotationSetterPlugin
, net.sf.basedb.core.plugin.
InteractivePlugin
)
net.sf.basedb.plugins.
MedianRatioNormalization
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.core.plugin.
AbstractExporterPlugin
(implements net.sf.basedb.core.plugin.
ImmediateDownloadExporter
)
net.sf.basedb.plugins.
BaseFileExporterPlugin
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
GalExporter
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
HelpExporter
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
PackedFileExporter
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
PlateMappingExporter
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
PluginConfigurationExporter
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.clients.web.plugins.
SimpleExport
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.plugin.
NonRestartable
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.util.zip.
AbstractFileUnpacker
(implements net.sf.basedb.util.zip.
FileUnpacker
, net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
Bzip2FileUnpacker
net.sf.basedb.plugins.
GzipFileUnpacker
net.sf.basedb.plugins.
TarFileUnpacker
net.sf.basedb.plugins.
ZipFileUnpacker
net.sf.basedb.plugins.
AbstractFlatFileImporter
(implements net.sf.basedb.core.plugin.
AutoDetectingImporter
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.batchimport.
AbstractItemImporter
<I> (implements net.sf.basedb.util.parser.
ConfigureByExample
, net.sf.basedb.core.plugin.
InteractivePlugin
)
net.sf.basedb.plugins.batchimport.
AnnotationTypeImporter
net.sf.basedb.plugins.batchimport.
ArrayBatchImporter
net.sf.basedb.plugins.batchimport.
ArrayDesignImporter
net.sf.basedb.plugins.batchimport.
ArraySlideImporter
net.sf.basedb.plugins.batchimport.
BioPlateImporter
net.sf.basedb.plugins.batchimport.
BioSourceImporter
net.sf.basedb.plugins.batchimport.
DerivedBioAssayImporter
net.sf.basedb.plugins.batchimport.
ExtractImporter
net.sf.basedb.plugins.batchimport.
FileImporter
net.sf.basedb.plugins.batchimport.
HybridizationImporter
net.sf.basedb.plugins.batchimport.
KitImporter
net.sf.basedb.plugins.batchimport.
LabeledExtractImporter
net.sf.basedb.plugins.batchimport.
PhysicalBioAssayImporter
net.sf.basedb.plugins.batchimport.
RawBioAssayImporter
net.sf.basedb.plugins.batchimport.
SampleImporter
net.sf.basedb.plugins.batchimport.
ScanImporter
net.sf.basedb.plugins.
AnnotationFlatFileImporter
(implements net.sf.basedb.util.parser.
ConfigureByExample
, net.sf.basedb.core.plugin.
InteractivePlugin
)
net.sf.basedb.plugins.
IlluminaRawDataImporter
(implements net.sf.basedb.core.plugin.
InteractivePlugin
)
net.sf.basedb.plugins.
PlateFlatFileImporter
(implements net.sf.basedb.util.parser.
ConfigureByExample
, net.sf.basedb.core.plugin.
InteractivePlugin
)
net.sf.basedb.plugins.
PlateMappingImporter
(implements net.sf.basedb.core.plugin.
InteractivePlugin
)
net.sf.basedb.plugins.
PrintMapFlatFileImporter
(implements net.sf.basedb.core.plugin.
InteractivePlugin
)
net.sf.basedb.plugins.
RawDataFlatFileImporter
(implements net.sf.basedb.core.plugin.
AnnotationSetterPlugin
, net.sf.basedb.util.parser.
ConfigureByExample
, net.sf.basedb.core.plugin.
InteractivePlugin
)
net.sf.basedb.plugins.
ReporterFlatFileImporter
(implements net.sf.basedb.util.parser.
ConfigureByExample
, net.sf.basedb.core.plugin.
InteractivePlugin
)
net.sf.basedb.plugins.gtf.
GtfReporterImporter
(implements net.sf.basedb.util.parser.
WrappedConfigureByExample
)
net.sf.basedb.plugins.
ReporterMapFlatFileImporter
(implements net.sf.basedb.util.parser.
ConfigureByExample
, net.sf.basedb.core.plugin.
InteractivePlugin
)
net.sf.basedb.plugins.gtf.
GtfReporterMapImporter
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.util.parser.
WrappedConfigureByExample
)
net.sf.basedb.plugins.executor.
AbstractIOSupport
(implements net.sf.basedb.plugins.executor.
IOSupport
)
net.sf.basedb.plugins.executor.
BaseFileExporterSupport
net.sf.basedb.plugins.executor.
BaseFileImporterSupport
net.sf.basedb.plugins.executor.
BfsExporterSupport
net.sf.basedb.plugins.executor.
BfsImporterSupport
net.sf.basedb.plugins.executor.
FileOnlyImporterSupport
net.sf.basedb.plugins.
BfsExporterPlugin
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
CdfFileReporterImporter
(implements net.sf.basedb.core.plugin.
AutoDetectingImporter
, net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
CloneReportersPlugin
(implements net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
HelpImporter
(implements net.sf.basedb.core.plugin.
AutoDetectingImporter
, net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
IntensityCalculatorPlugin
(implements net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
PluginConfigurationImporter
(implements net.sf.basedb.core.plugin.
AutoDetectingImporter
, net.sf.basedb.core.plugin.
InteractivePlugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.plugins.
SpotImageCreator
(implements net.sf.basedb.core.plugin.
Plugin
, net.sf.basedb.core.signal.
SignalTarget
)
net.sf.basedb.core.
AbstractQuery
(implements net.sf.basedb.core.query.
Query
)
net.sf.basedb.core.
AbstractHqlQuery
(implements net.sf.basedb.core.query.
HqlQuery
)
net.sf.basedb.core.
AbstractEntityQuery
(implements net.sf.basedb.core.query.
EntityQuery
)
net.sf.basedb.core.
DataQuery
<I>
net.sf.basedb.core.
ItemQuery
<I>
net.sf.basedb.core.
ReporterScoreQuery
net.sf.basedb.core.
SpecialQuery
<C>
net.sf.basedb.core.
AbstractSqlQuery
(implements net.sf.basedb.core.query.
SqlQuery
)
net.sf.basedb.core.
DynamicQuery
(implements net.sf.basedb.core.
ClonableReporterQuery
)
net.sf.basedb.core.
DataCube.RawMappingQuery
net.sf.basedb.core.
DynamicExtraValueQuery
net.sf.basedb.core.
DynamicPositionQuery
net.sf.basedb.core.
DynamicSpotQuery
net.sf.basedb.core.
DynamicRawDataQuery
net.sf.basedb.core.
DynamicReporterQuery
(implements net.sf.basedb.core.
ClonableReporterQuery
)
net.sf.basedb.core.hibernate.
AbstractQueryCache
net.sf.basedb.core.hibernate.
SessionWrapper
(implements org.hibernate.
Session
)
net.sf.basedb.core.hibernate.
StatelessSessionWrapper
(implements org.hibernate.
StatelessSession
)
net.sf.basedb.core.
AbstractResultList
<I> (implements net.sf.basedb.core.query.
ResultList
<I>)
net.sf.basedb.core.
ItemResultList
<I>
net.sf.basedb.core.migrate.
AbstractResultWriter
(implements net.sf.basedb.core.migrate.
ResultWriter
)
net.sf.basedb.core.migrate.
BooleanWriter
net.sf.basedb.core.migrate.
ByteArrayWriter
net.sf.basedb.core.migrate.
DateWriter
net.sf.basedb.core.migrate.
DoubleWriter
net.sf.basedb.core.migrate.
FloatWriter
net.sf.basedb.core.migrate.
IntegerWriter
net.sf.basedb.core.migrate.
LongWriter
net.sf.basedb.core.migrate.
ShortWriter
net.sf.basedb.core.migrate.
TextWriter
net.sf.basedb.core.migrate.
TimestampWriter
net.sf.basedb.core.signal.
AbstractSignalHandler
(implements net.sf.basedb.core.signal.
SignalHandler
)
net.sf.basedb.core.signal.
DelegatingSignalHandler
net.sf.basedb.core.signal.
EnhancedThreadSignalHandler
(implements net.sf.basedb.core.signal.
InterruptHandler
)
net.sf.basedb.core.signal.
ForwardingSignalHandler
net.sf.basedb.core.signal.
ProgressReporterSignalHandler
(implements net.sf.basedb.core.
ProgressReporter
)
net.sf.basedb.core.signal.
ThreadSignalHandler
net.sf.basedb.core.signal.
AbstractSignalReceiver
(implements net.sf.basedb.core.signal.
SignalReceiver
)
net.sf.basedb.core.signal.
LocalSignalReceiver
net.sf.basedb.core.signal.
SocketSignalReceiver
net.sf.basedb.clients.jobagent.
AgentSignalReceiver
net.sf.basedb.core.signal.
AbstractSignalTransporter
(implements net.sf.basedb.core.signal.
SignalTransporter
)
net.sf.basedb.core.signal.
ExtensionSignalTransporter
net.sf.basedb.core.signal.
LocalSignalTransporter
net.sf.basedb.core.signal.
SocketSignalTransporter
net.sf.basedb.util.listable.
AbstractSourceItemTransformer
(implements net.sf.basedb.util.listable.
SourceItemTransformer
)
net.sf.basedb.util.listable.
BioSourceToSampleTransformer
net.sf.basedb.util.listable.
CollectedExtractsToDerivedBioAssayTransformer
net.sf.basedb.util.listable.
CollectedExtractsToRawBioAssayTransformer
net.sf.basedb.util.listable.
CollectExtracts.CollectChildren
net.sf.basedb.util.listable.
CollectExtracts.CollectFromDerivedBioAssays
net.sf.basedb.util.listable.
CollectExtracts.CollectFromExtracts
net.sf.basedb.util.listable.
CollectExtracts.CollectFromRawBioAssays
net.sf.basedb.util.listable.
CollectExtracts.CollectParents
net.sf.basedb.util.listable.
DerivedBioAssayToChildDerivedBioAssayTransformer
net.sf.basedb.util.listable.
DerivedBioAssayToParentDerivedBioAssayTransformer
net.sf.basedb.util.listable.
DerivedBioAssayToPhysicalBioAssayTransformer
net.sf.basedb.util.listable.
DerivedBioAssayToRawBioAssayTransformer
net.sf.basedb.util.listable.
ExtractToChildExtractTransformer
net.sf.basedb.util.listable.
ExtractToParentExtractTransformer
net.sf.basedb.util.listable.
ExtractToPhysicalBioAssayTransformer
net.sf.basedb.util.listable.
ExtractToSampleTransformer
net.sf.basedb.util.listable.
PhysicalBioAssayToDerivedBioAssayTransformer
net.sf.basedb.util.listable.
PhysicalBioAssayToExtractTransformer
net.sf.basedb.util.listable.
RawBioAssayToDerivedBioAssayTransformer
net.sf.basedb.util.listable.
SampleToBioSourceTransformer
net.sf.basedb.util.listable.
SampleToChildSampleTransformer
net.sf.basedb.util.listable.
SampleToExtractTransformer
net.sf.basedb.util.listable.
SampleToParentSampleTransformer
net.sf.basedb.util.listable.
AbstractSourceItemTransformerFactory
(implements net.sf.basedb.util.listable.
SourceItemTransformerFactory
)
net.sf.basedb.util.listable.
ToBioSourceSourceItemTransformerFactory
net.sf.basedb.util.listable.
ToDerivedBioAssaySourceItemTransformerFactory
net.sf.basedb.util.listable.
ToExtractSourceItemTransformerFactory
net.sf.basedb.util.listable.
ToPhysicalBioAssaySourceItemTransformerFactory
net.sf.basedb.util.listable.
ToRawBioAssaySourceItemTransformerFactory
net.sf.basedb.util.listable.
ToSampleSourceItemTransformerFactory
net.sf.basedb.util.extensions.events.
ActionClassEventFilter
(implements net.sf.basedb.util.extensions.events.
EventFilter
)
net.sf.basedb.util.extensions.
ActionIterator
<A> (implements java.util.Iterator<E>)
net.sf.basedb.util.collections.
AddAllTransformer
<I> (implements net.sf.basedb.util.collections.
CollectionTransformer
<S,D>)
net.sf.basedb.core.query.
AddExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.affymetrix.
AffymetrixUtil
net.sf.basedb.clients.jobagent.
Agent
net.sf.basedb.clients.jobagent.
AgentController
net.sf.basedb.core.query.
Aggregations
net.sf.basedb.util.extensions.events.
AllEventsFilter
(implements net.sf.basedb.util.extensions.events.
EventFilter
)
net.sf.basedb.util.filter.
AllOfFilter
<T> (implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.ssl.
AllowAnyHostNameVerifyer
(implements javax.net.ssl.HostnameVerifier)
net.sf.basedb.core.query.
AndRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.core.
Annotation.QueryRuntimeFilterImpl
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.util.export.spotdata.
AnnotationAssayField
(implements net.sf.basedb.util.export.spotdata.
AssayField
)
net.sf.basedb.core.
AnnotationBatcher.CurrentAnnotationInfo
(implements net.sf.basedb.core.data.
LoggableData
)
net.sf.basedb.core.
AnnotationBatcher.InsertBatcher
net.sf.basedb.core.
AnnotationBatcher.UpdateBatcher
net.sf.basedb.core.snapshot.
AnnotationFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.plugins.
AnnotationFlatFileImporter.AnnotationValue
net.sf.basedb.plugins.
AnnotationFlatFileImporter.NewAnnotations
net.sf.basedb.core.query.
AnnotationJoin
(implements net.sf.basedb.core.query.
Join
)
net.sf.basedb.core.data.annotations.
AnnotationLink
net.sf.basedb.core.snapshot.
AnnotationLoaderUtil
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.core.log.db.
AnnotationLogger
(implements net.sf.basedb.core.log.
EntityLogger
)
net.sf.basedb.util.bfs.
AnnotationModel
(implements net.sf.basedb.util.bfs.
EventHandler
)
net.sf.basedb.util.overview.node.
AnnotationNameGenerator
(implements net.sf.basedb.util.overview.node.
NodeNameGenerator
<I>)
net.sf.basedb.util.bfs.
AnnotationParser
(implements net.sf.basedb.util.bfs.
BfsParser
)
net.sf.basedb.core.
AnnotationRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.core.
AnnotationBetweenRestriction
net.sf.basedb.core.
AnnotationInRestriction
net.sf.basedb.core.
AnnotationSimpleRestriction
net.sf.basedb.core.
HasAnnotationRestriction
net.sf.basedb.core.
AnnotationRestriction.Options
net.sf.basedb.core.query.
Annotations
net.sf.basedb.core.
AnnotationSet.ProjectSpecificAnnotationsRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.core.
AnnotationSet.QueryRuntimeFilterImpl
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.log.db.
AnnotationSetLogger
(implements net.sf.basedb.core.log.
EntityLogger
)
net.sf.basedb.core.snapshot.
AnnotationSetSnapshot
(implements java.io.Serializable)
net.sf.basedb.core.snapshot.
AnnotationSetSnapshot.SortByProjectComparator
(implements java.util.Comparator<T>)
net.sf.basedb.core.snapshot.
AnnotationSnapshot
(implements java.io.Serializable)
net.sf.basedb.core.snapshot.
AnnotationSnapshot.AnnotationTypeComparator
(implements java.util.Comparator<T>)
net.sf.basedb.core.
AnnotationType.RemoveInheritedAnnotationsAction
(implements net.sf.basedb.core.
TransactionalAction
)
net.sf.basedb.clients.web.plugins.
AnnotationTypeEnumerationLoader
(implements net.sf.basedb.clients.web.plugins.
DataLoader
<T>)
net.sf.basedb.core.snapshot.
AnnotationTypeFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.clients.web.plugins.
AnnotationTypeItemTypesLoader
(implements net.sf.basedb.clients.web.plugins.
DataLoader
<T>)
net.sf.basedb.util.
AnnotationUtil
net.sf.basedb.clients.web.
AnnotationUtil
net.sf.basedb.util.
AnnotationUtil.AnnotatableWrapper
net.sf.basedb.util.
AnnotationUtil.Cache
net.sf.basedb.clients.web.plugins.
AnyToAnyDataLoader
(implements net.sf.basedb.clients.web.plugins.
DataLoader
<T>)
net.sf.basedb.core.log.db.
AnyToAnyLogger
(implements net.sf.basedb.core.log.
EntityLogger
)
net.sf.basedb.util.overview.node.
AnyToAnyNameGenerator
(implements net.sf.basedb.util.overview.node.
NodeNameGenerator
<I>)
net.sf.basedb.core.query.
AnyToAnyRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.core.
Application
net.sf.basedb.core.
Application.Pinger
net.sf.basedb.util.
ArrayIterator
<E> (implements java.util.Iterator<E>)
net.sf.basedb.core.query.
AscOrder
(implements net.sf.basedb.core.query.
Order
)
net.sf.basedb.util.export.spotdata.
AssayPropertyField
(implements net.sf.basedb.util.export.spotdata.
AssayField
)
net.sf.basedb.core.authentication.
AuthenticatedUser
net.sf.basedb.core.authentication.
AuthenticationInformation
net.sf.basedb.core.authentication.
AuthenticationMethod
net.sf.basedb.util.overview.loader.
AutoChildNodeLoader
<I> (implements net.sf.basedb.util.overview.loader.
NodeLoader
<I>)
net.sf.basedb.util.
AutoDetectFileFormat
net.sf.basedb.util.
AutoDetectFileFormat.IsImportableFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.clients.web.
Base
net.sf.basedb.plugins.
Base1PluginExecuter.JobParameter
net.sf.basedb.plugins.
BaseFileExporterPlugin.ExtendedDynamicField
(implements net.sf.basedb.util.export.spotdata.
DynamicField
)
net.sf.basedb.util.importer.spotdata.
BaseFileImporter
net.sf.basedb.util.importer.spotdata.
BaseFileInfo
net.sf.basedb.util.importer.spotdata.
BaseFileInfo.ChildBioAssay
net.sf.basedb.util.importer.spotdata.
BaseFileInfo.SpotSectionInfo
net.sf.basedb.util.basefile.
BaseFileParser
net.sf.basedb.util.importer.
BaseFileWrapper
(implements net.sf.basedb.util.importer.
FileWrapper
)
net.sf.basedb.util.bfs.
BaseInputStreamLocator
(implements net.sf.basedb.util.bfs.
InputStreamLocator
)
net.sf.basedb.core.data.
BasicData
(implements net.sf.basedb.core.data.
IdentifiableData
)
net.sf.basedb.core.data.
AnnotationData
(implements net.sf.basedb.core.data.
LoggableData
)
net.sf.basedb.core.data.
AnnotationSetData
(implements net.sf.basedb.core.data.
LoggableData
, java.io.Serializable)
net.sf.basedb.core.data.
AnyToAnyData
(implements net.sf.basedb.core.data.
LoggableData
, net.sf.basedb.core.data.
NameableData
)
net.sf.basedb.core.data.
ArrayDesignBlockData
net.sf.basedb.core.data.
ArrayDesignPlateData
net.sf.basedb.core.data.
BioAssayData
(implements net.sf.basedb.core.data.
AnnotatableData
, net.sf.basedb.core.data.
NameableData
)
net.sf.basedb.core.data.
BioAssaySetData
(implements net.sf.basedb.core.data.
AnnotatableData
, net.sf.basedb.core.data.
FileStoreEnabledData
, net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
BioMaterialEventData
(implements net.sf.basedb.core.data.
LoggableData
, net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
BioMaterialEventSourceData
net.sf.basedb.core.data.
BioPlateEventParticipantData
net.sf.basedb.core.data.
BioPlateEventTypeData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RemovableData
, net.sf.basedb.core.data.
SystemData
)
net.sf.basedb.core.data.
BioPlateTypeData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
BioWellData
net.sf.basedb.core.data.
ChangeHistoryData
net.sf.basedb.core.data.
ChangeHistoryDetailData
net.sf.basedb.core.data.
ContextData
net.sf.basedb.core.data.
DataCubeColumnData
net.sf.basedb.core.data.
DataCubeData
net.sf.basedb.core.data.
DataCubeExtraValueData
net.sf.basedb.core.data.
DataCubeFilterData
net.sf.basedb.core.data.
DataCubeLayerData
net.sf.basedb.core.data.
DataFileTypeData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
DiskUsageData
net.sf.basedb.core.data.
ExtraValueData
(implements net.sf.basedb.core.data.
FileStoreEnabledData
)
net.sf.basedb.core.data.
ExtraValueTypeData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
FeatureData
(implements net.sf.basedb.core.data.
BatchableData
)
net.sf.basedb.core.
RawDataBatcher.FeatureProxy
net.sf.basedb.core.data.
FileSetData
net.sf.basedb.core.data.
FileSetMemberData
(implements net.sf.basedb.core.data.
LoggableData
)
net.sf.basedb.core.data.
GroupData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
RemovableData
, net.sf.basedb.core.data.
SystemData
)
net.sf.basedb.core.data.
HelpData
(implements net.sf.basedb.core.data.
NameableData
)
net.sf.basedb.core.data.
ItemListSyncFilterData
(implements net.sf.basedb.core.data.
NameableData
)
net.sf.basedb.core.data.
ItemSubtypeData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
RemovableData
, net.sf.basedb.core.data.
SystemData
)
net.sf.basedb.core.data.
ItemSubtypeFileTypeData
net.sf.basedb.core.data.
JobAgentSettingsData
net.sf.basedb.core.data.
KeyData
net.sf.basedb.core.data.
ItemKeyData
net.sf.basedb.core.data.
ProjectKeyData
net.sf.basedb.core.data.
RoleKeyData
net.sf.basedb.core.data.
MessageData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
MimeTypeData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
NewsData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
OwnedData
(implements net.sf.basedb.core.data.
OwnableData
)
net.sf.basedb.core.data.
ProjectData
(implements net.sf.basedb.core.data.
AnnotatableData
, net.sf.basedb.core.data.
LoggableData
, net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
SharedData
(implements net.sf.basedb.core.data.
ShareableData
)
net.sf.basedb.core.data.
CommonData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
AnnotatedData
(implements net.sf.basedb.core.data.
AnnotatableData
, net.sf.basedb.core.data.
LoggableData
)
net.sf.basedb.core.data.
ArrayBatchData
(implements net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
ArrayDesignData
(implements net.sf.basedb.core.data.
FileStoreEnabledData
, net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
ArraySlideData
(implements net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
BioMaterialData
(implements net.sf.basedb.core.data.
SubtypableData
)
net.sf.basedb.core.data.
BioSourceData
(implements net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
MeasuredBioMaterialData
net.sf.basedb.core.data.
ExtractData
net.sf.basedb.core.data.
SampleData
net.sf.basedb.core.data.
BioPlateData
(implements net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
DerivedBioAssayData
(implements net.sf.basedb.core.data.
FileStoreEnabledData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
SubtypableData
)
net.sf.basedb.core.data.
ExperimentData
(implements net.sf.basedb.core.data.
DiskConsumableData
, net.sf.basedb.core.data.
LoggableData
, net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
HardwareData
(implements net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
SubtypableData
)
net.sf.basedb.core.data.
ItemListData
net.sf.basedb.core.data.
KitData
(implements net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
SubtypableData
)
net.sf.basedb.core.data.
PhysicalBioAssayData
(implements net.sf.basedb.core.data.
SubtypableData
)
net.sf.basedb.core.data.
PlateData
(implements net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
PluginConfigurationData
(implements net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
ProtocolData
(implements net.sf.basedb.core.data.
FileAttachableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
SubtypableData
)
net.sf.basedb.core.data.
RawBioAssayData
(implements net.sf.basedb.core.data.
DiskConsumableData
, net.sf.basedb.core.data.
FileStoreEnabledData
, net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
SoftwareData
(implements net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
SubtypableData
)
net.sf.basedb.core.data.
TagData
(implements net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
SubtypableData
)
net.sf.basedb.core.data.
AnnotationTypeCategoryData
(implements net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
AnnotationTypeData
(implements net.sf.basedb.core.data.
LoggableData
, net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
BioPlateEventData
(implements net.sf.basedb.core.data.
LoggableData
, net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
ClientData
(implements net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
DirectoryData
(implements net.sf.basedb.core.data.
SystemData
)
net.sf.basedb.core.data.
FileData
(implements net.sf.basedb.core.data.
DiskConsumableData
, net.sf.basedb.core.data.
LoggableData
, net.sf.basedb.core.data.
SubtypableData
)
net.sf.basedb.core.data.
FileServerData
net.sf.basedb.core.data.
FormulaData
(implements net.sf.basedb.core.data.
LoggableData
, net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
JobAgentData
net.sf.basedb.core.data.
JobData
(implements net.sf.basedb.core.data.
SubtypableData
)
net.sf.basedb.core.data.
PermissionTemplateData
net.sf.basedb.core.data.
PlateMappingData
(implements net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
PlateTypeData
(implements net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
PluginDefinitionData
(implements net.sf.basedb.core.data.
AnnotatableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
ReporterCloneTemplateData
(implements net.sf.basedb.core.data.
LoggableData
, net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
ReporterListData
(implements net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
ParameterValueData
<T>
net.sf.basedb.core.data.
BooleanParameterValueData
net.sf.basedb.core.data.
DateParameterValueData
net.sf.basedb.core.data.
DoubleParameterValueData
net.sf.basedb.core.data.
FloatParameterValueData
net.sf.basedb.core.data.
IntegerParameterValueData
net.sf.basedb.core.data.
ItemParameterValueData
net.sf.basedb.core.data.
LongParameterValueData
net.sf.basedb.core.data.
StringParameterValueData
net.sf.basedb.core.data.
TextParameterValueData
net.sf.basedb.core.data.
TimestampParameterValueData
net.sf.basedb.core.data.
PasswordData
net.sf.basedb.core.data.
PlateEventData
(implements net.sf.basedb.core.data.
LoggableData
)
net.sf.basedb.core.data.
PlateEventTypeData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
PlateGeometryData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
PlatformData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
PlatformFileTypeData
net.sf.basedb.core.data.
PlatformVariantData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
PluginTypeData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
QuantityData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RemovableData
, net.sf.basedb.core.data.
SystemData
)
net.sf.basedb.core.data.
QuotaData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RemovableData
, net.sf.basedb.core.data.
SystemData
)
net.sf.basedb.core.data.
QuotaTypeData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
SystemData
)
net.sf.basedb.core.data.
RawData
(implements net.sf.basedb.core.data.
BatchableData
, net.sf.basedb.core.data.
ExtendableData
)
net.sf.basedb.util.importer.spotdata.
BaseFileImporter.RawDataProxy
net.sf.basedb.core.data.
ReporterData
(implements net.sf.basedb.core.data.
BatchableData
, net.sf.basedb.core.data.
ExtendableData
, net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.util.importer.spotdata.
BaseFileImporter.ReporterProxy
net.sf.basedb.core.
RawDataBatcher.ReporterProxy
net.sf.basedb.core.data.
ReporterTypeData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
RoleData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
RemovableData
, net.sf.basedb.core.data.
SystemData
)
net.sf.basedb.core.data.
RootRawBioAssayData
(implements net.sf.basedb.core.data.
AnnotatableData
, net.sf.basedb.core.data.
NameableData
)
net.sf.basedb.core.data.
SchemaVersionData
net.sf.basedb.core.data.
SessionData
net.sf.basedb.core.data.
SettingData
net.sf.basedb.core.data.
ClientDefaultSettingData
net.sf.basedb.core.data.
GlobalDefaultSettingData
net.sf.basedb.core.data.
UserClientSettingData
net.sf.basedb.core.data.
UserDefaultSettingData
net.sf.basedb.core.data.
SpotImagesData
net.sf.basedb.core.data.
TransformationData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
UnitData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RemovableData
)
net.sf.basedb.core.data.
UnitSymbolData
net.sf.basedb.core.data.
UserData
(implements net.sf.basedb.core.data.
ExtendableData
, net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
, net.sf.basedb.core.data.
RemovableData
, net.sf.basedb.core.data.
SystemData
)
net.sf.basedb.core.data.
UserDeviceData
(implements net.sf.basedb.core.data.
NameableData
, net.sf.basedb.core.data.
RegisteredData
)
net.sf.basedb.core.data.
VirtualDbData
net.sf.basedb.core.data.
WellData
(implements net.sf.basedb.core.data.
AnnotatableData
)
net.sf.basedb.core.
BasicItem
(implements net.sf.basedb.core.
Identifiable
)
net.sf.basedb.core.
Annotation
net.sf.basedb.core.
AnnotationSet
(implements net.sf.basedb.core.
Transactional
)
net.sf.basedb.core.
AnyToAny
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Transactional
)
net.sf.basedb.core.
BasicChildItem
net.sf.basedb.core.
ItemSubtypeFileType
(implements net.sf.basedb.core.
UsableDataFileType
)
net.sf.basedb.core.
PlatformFileType
(implements net.sf.basedb.core.
UsableDataFileType
)
net.sf.basedb.core.
PlatformVariant
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
BioPlateEventType
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
, net.sf.basedb.core.
SystemItem
)
net.sf.basedb.core.
BioPlateType
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
ChangeHistory
net.sf.basedb.core.
ChildItem
net.sf.basedb.core.
ArrayDesignBlock
net.sf.basedb.core.
ArrayDesignPlate
net.sf.basedb.core.
BioAssay
(implements net.sf.basedb.core.
Annotatable
, net.sf.basedb.core.
Nameable
)
net.sf.basedb.core.
BioAssaySet
(implements net.sf.basedb.core.
Annotatable
, net.sf.basedb.core.
FileStoreEnabled
, net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
BioMaterialEvent
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
BioPlateEventParticipant
net.sf.basedb.core.
BioWell
net.sf.basedb.core.
DataCube
net.sf.basedb.core.
DataCubeColumn
net.sf.basedb.core.
DataCubeExtraValue
net.sf.basedb.core.
DataCubeFilter
net.sf.basedb.core.
DataCubeLayer
net.sf.basedb.core.
ExtraValue
(implements net.sf.basedb.core.
FileStoreEnabled
)
net.sf.basedb.core.
Help
(implements net.sf.basedb.core.
Nameable
)
net.sf.basedb.core.
JobAgentSettings
net.sf.basedb.core.
PlateEvent
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
PlateEventType
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
RootRawBioAssay
(implements net.sf.basedb.core.
Annotatable
, net.sf.basedb.core.
Nameable
)
net.sf.basedb.core.
SpotImages
net.sf.basedb.core.
SyncFilter
(implements net.sf.basedb.core.
Nameable
)
net.sf.basedb.core.
Transformation
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
VirtualDb
net.sf.basedb.core.
Well
(implements net.sf.basedb.core.
Annotatable
)
net.sf.basedb.core.
DataFileType
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
, net.sf.basedb.core.
Validatable
)
net.sf.basedb.core.
DiskUsage
net.sf.basedb.core.
ExtraValueType
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
FileSet
net.sf.basedb.core.
FileSetMember
net.sf.basedb.core.
Group
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Removable
, net.sf.basedb.core.
SystemItem
)
net.sf.basedb.core.
ItemSubtype
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Removable
, net.sf.basedb.core.
Subtypable
, net.sf.basedb.core.
SystemItem
)
net.sf.basedb.core.
Key
net.sf.basedb.core.
ItemKey
net.sf.basedb.core.
ProjectKey
net.sf.basedb.core.
RoleKey
(implements net.sf.basedb.core.
Nameable
)
net.sf.basedb.core.
Message
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
MimeType
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
News
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Removable
, net.sf.basedb.core.
Validatable
)
net.sf.basedb.core.
OwnedItem
(implements net.sf.basedb.core.
Ownable
)
net.sf.basedb.core.
Project
(implements net.sf.basedb.core.
Annotatable
, net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
SharedItem
(implements net.sf.basedb.core.
Shareable
)
net.sf.basedb.core.
CommonItem
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
AnnotatedItem
(implements net.sf.basedb.core.
Annotatable
)
net.sf.basedb.core.
ArrayBatch
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
ArrayDesign
(implements net.sf.basedb.core.
FileStoreEnabled
, net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
ArraySlide
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
BioMaterial
(implements net.sf.basedb.core.
Listable
, net.sf.basedb.core.
Subtypable
)
net.sf.basedb.core.
BioSource
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
MeasuredBioMaterial
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
Extract
net.sf.basedb.core.
Sample
net.sf.basedb.core.
BioPlate
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
DerivedBioAssay
(implements net.sf.basedb.core.
FileStoreEnabled
, net.sf.basedb.core.
Listable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Subtypable
)
net.sf.basedb.core.
Experiment
(implements net.sf.basedb.core.
DiskConsumable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Transactional
)
net.sf.basedb.core.
Hardware
(implements net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Subtypable
)
net.sf.basedb.core.
ItemList
net.sf.basedb.core.
Kit
(implements net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Subtypable
)
net.sf.basedb.core.
PhysicalBioAssay
(implements net.sf.basedb.core.
Listable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Subtypable
)
net.sf.basedb.core.
Plate
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
PluginConfiguration
(implements net.sf.basedb.core.
AnnotatableProxy
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Transactional
)
net.sf.basedb.core.
Protocol
(implements net.sf.basedb.core.
FileAttachable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Subtypable
)
net.sf.basedb.core.
RawBioAssay
(implements net.sf.basedb.core.
DiskConsumable
, net.sf.basedb.core.
FileStoreEnabled
, net.sf.basedb.core.
Listable
, net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
Software
(implements net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Subtypable
)
net.sf.basedb.core.
Tag
(implements net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Subtypable
)
net.sf.basedb.core.
AnnotationType
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
AnnotationTypeCategory
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
BioPlateEvent
(implements net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Transactional
)
net.sf.basedb.core.
Client
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
File
(implements net.sf.basedb.core.
DiskConsumable
, net.sf.basedb.core.
Subtypable
, net.sf.basedb.core.
Transactional
)
net.sf.basedb.core.
FileServer
net.sf.basedb.core.
Formula
(implements net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Validatable
)
net.sf.basedb.core.
Job
(implements net.sf.basedb.core.
Subtypable
, net.sf.basedb.core.
Transactional
)
net.sf.basedb.core.
JobAgent
net.sf.basedb.core.
PermissionTemplate
net.sf.basedb.core.
PlateMapping
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
PlateType
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
PluginDefinition
(implements net.sf.basedb.core.
AnnotatableProxy
, net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
ReporterCloneTemplate
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
ReporterList
(implements net.sf.basedb.core.
Registered
)
net.sf.basedb.core.
Directory
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
, net.sf.basedb.core.
SystemItem
)
net.sf.basedb.core.
PlateGeometry
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
Platform
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
PluginType
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
Quantity
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
, net.sf.basedb.core.
SystemItem
)
net.sf.basedb.core.
Quota
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
, net.sf.basedb.core.
SystemItem
)
net.sf.basedb.core.
QuotaType
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
SystemItem
)
net.sf.basedb.core.
ReporterType
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
Role
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Removable
, net.sf.basedb.core.
SystemItem
)
net.sf.basedb.core.
Session
net.sf.basedb.core.
Setting
net.sf.basedb.core.
ClientDefaultSetting
net.sf.basedb.core.
GlobalDefaultSetting
net.sf.basedb.core.
UserClientSetting
net.sf.basedb.core.
UserDefaultSetting
net.sf.basedb.core.
Unit
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Removable
)
net.sf.basedb.core.
User
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Registered
, net.sf.basedb.core.
Removable
, net.sf.basedb.core.
SystemItem
)
net.sf.basedb.core.
UserDevice
(implements net.sf.basedb.core.
Nameable
, net.sf.basedb.core.
Registered
)
net.sf.basedb.util.overview.filter.
BasicItemFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.overview.loader.
BasicItemNodeLoaderFactory
(implements net.sf.basedb.util.overview.loader.
NodeLoaderFactory
<L,K>)
net.sf.basedb.util.overview.validator.
BasicItemNodeValidatorFactory
(implements net.sf.basedb.util.overview.validator.
NodeValidatorFactory
<L,K>)
net.sf.basedb.util.collections.
BasicItemToIdTransformer
(implements net.sf.basedb.util.collections.
CollectionTransformer
<S,D>)
net.sf.basedb.util.overview.validator.
BasicNodeValidator
<I> (implements net.sf.basedb.util.overview.validator.
NodeValidator
<I>)
net.sf.basedb.util.overview.validator.
AnnotationValidator
net.sf.basedb.util.overview.validator.
AnyToAnyValidator
net.sf.basedb.util.overview.validator.
DataFileValidator
net.sf.basedb.util.overview.validator.
NameableNodeValidator
<I>
net.sf.basedb.util.overview.validator.
ArrayBatchValidator
net.sf.basedb.util.overview.validator.
ArrayDesignValidator
net.sf.basedb.util.overview.validator.
ArraySlideValidator
net.sf.basedb.util.overview.validator.
BioPlateValidator
net.sf.basedb.util.overview.validator.
BioSourceValidator
net.sf.basedb.util.overview.validator.
DerivedBioAssayValidator
net.sf.basedb.util.overview.validator.
ExperimentalFactorValidator
net.sf.basedb.util.overview.validator.
ExperimentValidator
net.sf.basedb.util.overview.validator.
ExtractValidator
net.sf.basedb.util.overview.validator.
HardwareValidator
net.sf.basedb.util.overview.validator.
KitValidator
net.sf.basedb.util.overview.validator.
PhysicalBioAssayValidator
net.sf.basedb.util.overview.validator.
PlatformValidator
net.sf.basedb.util.overview.validator.
ProtocolParameterValidator
net.sf.basedb.util.overview.validator.
ProtocolValidator
net.sf.basedb.util.overview.validator.
RawBioAssayValidator
net.sf.basedb.util.overview.validator.
SampleValidator
net.sf.basedb.util.overview.validator.
SoftwareValidator
net.sf.basedb.util.overview.validator.
TagValidator
net.sf.basedb.core.
BatchedPropertyInfo
net.sf.basedb.core.
BatchUtil
net.sf.basedb.util.bcrypt.
BCrypt
net.sf.basedb.util.extensions.debug.
BeanActionFactory
(implements net.sf.basedb.util.extensions.
ActionFactory
<A>)
net.sf.basedb.core.query.
BetweenRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.plugins.
BfsExporterPlugin.ExtendedExportableField
net.sf.basedb.util.importer.spotdata.
BfsImporter
net.sf.basedb.util.importer.spotdata.
BfsImporter.ProgressEventHandler
(implements net.sf.basedb.util.bfs.
EventHandler
)
net.sf.basedb.clients.web.plugins.
BioAssayExperimentalFactorLoader
(implements net.sf.basedb.clients.web.plugins.
DataLoader
<T>)
net.sf.basedb.util.
BioAssaySetFilterUtil
net.sf.basedb.util.
BioAssaySetUtil
net.sf.basedb.core.log.db.
BioMaterialEventLogger
(implements net.sf.basedb.core.log.
EntityLogger
)
net.sf.basedb.core.
BioMaterialEventSource
(implements net.sf.basedb.core.
AccessControlled
)
net.sf.basedb.core.
BioMaterialEventSource.BioMaterialEventSourceTransformer
(implements net.sf.basedb.util.transform.
Transformer
<T,F>)
net.sf.basedb.clients.web.plugins.
BioMaterialEventSourceFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.util.biomaterial.
BioSourceToSampleTransformer
(implements net.sf.basedb.util.collections.
CollectionTransformer
<S,D>)
net.sf.basedb.util.overview.node.
BioWellNameGenerator
(implements net.sf.basedb.util.overview.node.
NodeNameGenerator
<I>)
net.sf.basedb.core.
BlockInfo
net.sf.basedb.core.query.
BooleanExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.formatter.
BooleanFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.clients.web.resources.
Bundle
net.sf.basedb.clients.web.taglib.table.
Button.ButtonActionWrapper
(implements net.sf.basedb.clients.web.extensions.toolbar.
ButtonAction
, net.sf.basedb.clients.web.extensions.
DynamicActionAttributes
)
net.sf.basedb.clients.web.servlet.
CacheControlFilter
(implements javax.servlet.
Filter
)
net.sf.basedb.core.query.
CaseExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.affymetrix.
CdfValidationFactory
(implements net.sf.basedb.util.extensions.
ActionFactory
<A>)
net.sf.basedb.util.affymetrix.
CdfValidator
net.sf.basedb.util.affymetrix.
CelValidationFactory
(implements net.sf.basedb.util.extensions.
ActionFactory
<A>)
net.sf.basedb.util.affymetrix.
CelValidator
net.sf.basedb.util.
ChainedProgressReporter
(implements net.sf.basedb.core.
ProgressReporter
)
net.sf.basedb.clients.web.plugins.
ChangeHistoryDetailLoader
(implements net.sf.basedb.clients.web.plugins.
DataLoader
<T>)
net.sf.basedb.clients.web.
ChangeHistoryUtil
net.sf.basedb.util.jep.
ChannelFunction
(implements net.sf.basedb.util.jep.
JepExpressionFunction
)
net.sf.basedb.clients.web.servlet.
CharacterEncodingFilter
(implements javax.servlet.
Filter
)
net.sf.basedb.util.biomaterial.
ChildrenTransformer
<I> (implements net.sf.basedb.util.collections.
CollectionTransformer
<S,D>)
java.lang.ClassLoader
net.sf.basedb.util.
JarClassLoader
net.sf.basedb.util.
ClassLocal
<E>
net.sf.basedb.util.error.
ClassMapErrorHandler
(implements net.sf.basedb.util.error.
ErrorHandler
)
net.sf.basedb.util.
ClassUtil
net.sf.basedb.util.extensions.
ClientContext
net.sf.basedb.core.
AuthenticationContext
net.sf.basedb.clients.web.extensions.
JspContext
net.sf.basedb.clients.jobagent.
CmdLine
net.sf.basedb.util.parser.
ColFunction
(implements net.sf.basedb.util.jep.
JepFunction
)
net.sf.basedb.util.listable.
CollectExtracts
net.sf.basedb.clients.web.formatter.
ColorFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.util.
ColorGenerator
net.sf.basedb.core.
Coloring
(implements net.sf.basedb.core.
AccessControlled
)
net.sf.basedb.core.data.
ColoringData
(implements net.sf.basedb.core.data.
ComponentData
)
net.sf.basedb.util.parser.
ColumnMapper
(implements net.sf.basedb.util.parser.
Mapper
)
net.sf.basedb.util.extensions.events.
CombiningEventFilter
(implements net.sf.basedb.util.extensions.events.
EventFilter
)
net.sf.basedb.clients.web.extensions.toolbar.
CompactButtonRenderer
(implements net.sf.basedb.util.extensions.
Renderer
<A>)
net.sf.basedb.util.
ComparableComparator
<T> (implements java.util.Comparator<T>)
org.apache.jasper.compiler.
Compiler
org.apache.jasper.compiler.
JDTCompiler
net.sf.basedb.clients.web.extensions.
XJspCompiler
net.sf.basedb.util.parser.
CompoundMapper
(implements net.sf.basedb.util.parser.
Mapper
)
net.sf.basedb.core.query.
ConditionalQueryElement
(implements net.sf.basedb.core.query.
Expression
, net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.core.
Config
net.sf.basedb.util.uri.
ConnectionManagerUtil
net.sf.basedb.util.uri.
ConnectionParameters
net.sf.basedb.util.
ConsoleProgressReporter
(implements net.sf.basedb.core.
ProgressReporter
)
net.sf.basedb.util.parser.
ConstantMapper
(implements net.sf.basedb.util.parser.
Mapper
)
net.sf.basedb.clients.web.servlet.
ContentSecurityPolicyFilter
(implements javax.servlet.
Filter
)
net.sf.basedb.core.data.
ContextIndex
(implements java.io.Serializable)
net.sf.basedb.core.
ContextKey
net.sf.basedb.util.
ContextUtil
net.sf.basedb.util.
ContextUtil.ContextResult
net.sf.basedb.util.
ContextUtil.IsInContextFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.jep.convert.
ConverterFactory
net.sf.basedb.util.
Coordinate
net.sf.basedb.core.query.
CountExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.parser.
CropStringMapper
(implements net.sf.basedb.util.parser.
Mapper
)
net.sf.basedb.clients.web.formatter.
DataFileFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.util.parser.
DataNoFunction
(implements net.sf.basedb.util.jep.
JepFunction
)
net.sf.basedb.util.bfs.
DataParser
(implements net.sf.basedb.util.bfs.
BfsParser
)
net.sf.basedb.clients.web.plugins.
DataQueryWrapper
(implements net.sf.basedb.clients.web.plugins.
QueryWrapper
<T>)
net.sf.basedb.core.
DataResultIterator
<I> (implements net.sf.basedb.core.query.
ResultIterator
<I>)
net.sf.basedb.util.formatter.
DateFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.core.
DateUtil
net.sf.basedb.core.
DbControl
net.sf.basedb.core.
DbControl.SaveIf
net.sf.basedb.core.hibernate.
DbIndexWork
(implements org.hibernate.jdbc.
Work
)
net.sf.basedb.core.log.db.
DbLogManager
(implements net.sf.basedb.core.log.
LogManager
)
net.sf.basedb.core.log.db.
DbLogManagerFactory
(implements net.sf.basedb.util.extensions.
ActionFactory
<A>, net.sf.basedb.core.log.
LogManagerFactory
)
net.sf.basedb.plugins.gtf.
DefaultConfigurationValues
(implements net.sf.basedb.core.plugin.
ParameterValues
)
net.sf.basedb.core.log.db.
DefaultEntityLogger
(implements net.sf.basedb.core.log.
EntityLogger
)
net.sf.basedb.util.extensions.
DefaultFilter
(implements net.sf.basedb.util.extensions.
ExtensionsFilter
)
net.sf.basedb.util.extensions.manager.
Settings
(implements net.sf.basedb.util.extensions.
ExtensionsFilter
)
net.sf.basedb.util.parser.
DefaultItemFunction
<T> (implements net.sf.basedb.util.jep.
JepFunction
)
net.sf.basedb.clients.jobagent.handlers.
DefaultRequestHandler
(implements net.sf.basedb.util.jobagent.
RequestHandler
)
net.sf.basedb.util.extensions.manager.filter.
DeletedFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.extensions.manager.processor.
DeleteResourcesProcessor
(implements net.sf.basedb.util.extensions.manager.
ExtensionsFileProcessor
)
net.sf.basedb.clients.web.taglib.
DeprecationLogger
net.sf.basedb.core.
DerivedBioAssay.FixDerivedBioAssayParentsRecursivelyAction
(implements net.sf.basedb.core.
TransactionalAction
)
net.sf.basedb.core.query.
DescOrder
(implements net.sf.basedb.core.query.
Order
)
java.util.Dictionary<K,V>
java.util.Hashtable<K,V> (implements java.lang.Cloneable, java.util.Map<K,V>, java.io.Serializable)
org.nfunk.jep.
FunctionTable
net.sf.basedb.util.jep.
FunctionSafeJep.SafeFunctionTable
net.sf.basedb.util.
Diff3
net.sf.basedb.util.overview.cache.
DirectionalCacheKey
net.sf.basedb.core.snapshot.
DisabledInheritanceFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.extensions.manager.processor.
DisablePluginsProcessor
(implements net.sf.basedb.util.extensions.manager.
ExtensionsFileProcessor
)
net.sf.basedb.util.importer.
DiskFileWrapper
(implements net.sf.basedb.util.importer.
FileWrapper
)
net.sf.basedb.util.bfs.
DiskInputStreamLocator
(implements net.sf.basedb.util.bfs.
InputStreamLocator
)
net.sf.basedb.core.
DiskUsageStatistics
net.sf.basedb.core.
DiskUsageStatistics.Summary
net.sf.basedb.core.query.
DivideExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.
DropDynamicTableAction
(implements net.sf.basedb.core.
TransactionalAction
)
net.sf.basedb.clients.jobagent.executors.
DummyJobExecutor
(implements net.sf.basedb.clients.jobagent.
JobExecutor
)
net.sf.basedb.clients.web.extensions.service.
DummyService
(implements net.sf.basedb.util.extensions.
ActionFactory
<A>, net.sf.basedb.clients.web.extensions.service.
ServiceControllerAction
)
net.sf.basedb.core.query.
Dynamic
net.sf.basedb.clients.web.extensions.
DynamicActionAttribute
net.sf.basedb.clients.web.extensions.
DynamicActionAttributeSupport
(implements net.sf.basedb.clients.web.extensions.
DynamicActionAttributes
)
net.sf.basedb.clients.web.extensions.toolbar.
ButtonBean
(implements net.sf.basedb.clients.web.extensions.toolbar.
ButtonAction
)
net.sf.basedb.clients.web.extensions.menu.
MenuItemBean
(implements net.sf.basedb.clients.web.extensions.menu.
MenuItemAction
)
net.sf.basedb.clients.web.extensions.tabcontrol.
TabBean
(implements net.sf.basedb.clients.web.extensions.tabcontrol.
TabAction
)
net.sf.basedb.core.
DynamicJoin
(implements net.sf.basedb.core.query.
Join
)
net.sf.basedb.core.
DynamicPositionQueryJoiners
net.sf.basedb.core.
DynamicPositionQueryJoiners.ExtraValueJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.core.
DynamicPositionQueryJoiners.ReporterJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.core.
DynamicPositionQueryJoiners.ReporterListJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.clients.web.plugins.
DynamicQueryWrapper
(implements net.sf.basedb.clients.web.plugins.
QueryWrapper
<T>)
net.sf.basedb.core.
DynamicRawDataQuery.RawBioAssayJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.core.
DynamicRawDataQuery.ReporterJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.core.
DynamicRawDataQuery.ReporterListJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.core.
DynamicReporterQuery.MasterReporterJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.core.
DynamicReporterQuery.ReporterListJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.core.
DynamicRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.core.
DynamicResultIterator
(implements net.sf.basedb.core.query.
SqlResultIterator
)
net.sf.basedb.core.
DynamicResultIterator.SqlResultImpl
(implements net.sf.basedb.core.query.
SqlResult
)
net.sf.basedb.core.
DynamicSpotQueryJoiners
net.sf.basedb.core.
DynamicSpotQueryJoiners.ExtraValueJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.core.
DynamicSpotQueryJoiners.RawDataJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.core.
DynamicSpotQueryJoiners.ReporterJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.core.
DynamicSpotQueryJoiners.ReporterListJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.clients.web.
DynamicUtil
net.sf.basedb.clients.web.
DynamicUtil.SelectedInfo
net.sf.basedb.clients.web.extensions.edit.
EditUtil
net.sf.basedb.util.
EmailUtil
org.hibernate.
EmptyInterceptor
(implements org.hibernate.
Interceptor
, java.io.Serializable)
net.sf.basedb.core.log.
LoggingInterceptor
net.sf.basedb.util.encode.
EncodeUtil
net.sf.basedb.core.dbengine.
EngineFactory
net.sf.basedb.core.log.
EntityDetails
net.sf.basedb.core.log.
EntityLogOptions
net.sf.basedb.util.
Enumeration
<K,V> (implements java.io.Serializable)
net.sf.basedb.util.
Enumeration.Entry
<K,V>
net.sf.basedb.util.formatter.
EnumFormatter
<T> (implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.core.query.
EqRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.util.filter.
EqualsFilter
<T> (implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.
EqualsHelper
net.sf.basedb.util.bfs.
EventType
<T>
net.sf.basedb.util.extensions.events.
EventType
net.sf.basedb.util.extensions.events.
EventTypeFilter
(implements net.sf.basedb.util.extensions.events.
EventFilter
)
net.sf.basedb.core.signal.
ExceptionInterruptHandler
(implements net.sf.basedb.core.signal.
InterruptHandler
)
net.sf.basedb.core.hibernate.
ExecuteUpdateWork
(implements org.hibernate.jdbc.
ReturningWork
<T>)
net.sf.basedb.clients.web.
ExperimentExplorer
net.sf.basedb.clients.web.
ExperimentExplorer.AnnotationGroup
(implements java.lang.Comparable<T>)
net.sf.basedb.clients.web.
ExperimentExplorer.AnnotationSummary
net.sf.basedb.clients.web.
ExperimentExplorer.InExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.clients.web.
ExperimentExplorer.ReporterPositions
net.sf.basedb.clients.web.servlet.
ExperimentExplorerPlotServlet.ColumnKey
(implements java.lang.Comparable<T>)
net.sf.basedb.core.query.
ExpExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.export.spotdata.
ExportableFieldFactory
net.sf.basedb.util.export.spotdata.
ExportableFieldFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.clients.web.plugins.
ExportedProperty
net.sf.basedb.core.query.
Expressions
net.sf.basedb.core.query.
ExpressionSelect
(implements net.sf.basedb.core.query.
Select
)
net.sf.basedb.core.
ExtendedProperties
net.sf.basedb.core.
ExtendedProperty
net.sf.basedb.core.
ClonableProperty
(implements java.lang.Comparable<T>)
net.sf.basedb.core.
RawDataProperty
net.sf.basedb.core.
ExtendedPropertyAccessor
(implements org.hibernate.property.access.spi.
PropertyAccessStrategy
)
net.sf.basedb.core.
ExtendedPropertyAccessor.GetterSetter
(implements org.hibernate.property.access.spi.
Getter
, org.hibernate.property.access.spi.
PropertyAccess
, org.hibernate.property.access.spi.
Setter
)
net.sf.basedb.clients.web.formatter.
ExtendedPropertyFormatter
<T> (implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.core.
ExtendedPropertyLinker
net.sf.basedb.util.extensions.
ExtensionBean
<A> (implements net.sf.basedb.util.extensions.
Extension
<A>)
net.sf.basedb.util.overview.loader.
ExtensionChildNodeLoader
<I> (implements net.sf.basedb.util.overview.loader.
NodeLoader
<I>)
net.sf.basedb.util.extensions.events.
ExtensionEventFilter
(implements net.sf.basedb.util.extensions.events.
EventFilter
)
net.sf.basedb.util.extensions.manager.
ExtensionKey
(implements net.sf.basedb.util.extensions.manager.
ObjectKey
<O>)
net.sf.basedb.util.overview.validator.
ExtensionNodeValidator
<I> (implements net.sf.basedb.util.overview.validator.
NodeValidator
<I>)
net.sf.basedb.util.extensions.
ExtensionPointBean
<A> (implements net.sf.basedb.util.extensions.
ExtensionPoint
<A>)
net.sf.basedb.util.extensions.events.
ExtensionPointEventFilter
(implements net.sf.basedb.util.extensions.events.
EventFilter
)
net.sf.basedb.util.extensions.xml.
ExtensionPointFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.extensions.manager.
ExtensionPointKey
(implements net.sf.basedb.util.extensions.manager.
ObjectKey
<O>)
net.sf.basedb.clients.web.extensions.
ExtensionsControl
(implements net.sf.basedb.core.
AccessControlled
)
net.sf.basedb.util.extensions.manager.
ExtensionsFile
(implements java.lang.Comparable<T>)
net.sf.basedb.util.extensions.manager.
ExtensionsFile.WriteableExtensionsFile
net.sf.basedb.core.signal.
ExtensionSignalTransporter.SendSignalRenderer
(implements net.sf.basedb.util.extensions.
Renderer
<A>)
net.sf.basedb.util.extensions.
ExtensionsInvoker
<A> (implements java.lang.Iterable<T>)
net.sf.basedb.util.extensions.manager.
ExtensionsManager
net.sf.basedb.util.extensions.manager.
ExtensionsManager.JarFirstURIComparator
(implements java.util.Comparator<T>)
net.sf.basedb.util.extensions.
ExtensionsUtil
net.sf.basedb.plugins.executor.
ExternalProgramExecutor.RequestWrapper
(implements net.sf.basedb.core.plugin.
Request
)
net.sf.basedb.plugins.executor.
ExternalProgramExecutor.ResponseWrapper
(implements net.sf.basedb.core.plugin.
Response
)
net.sf.basedb.util.extensions.manager.processor.
ExtractResourcesProcessor
(implements net.sf.basedb.util.extensions.manager.
ExtensionsFileProcessor
)
net.sf.basedb.util.biomaterial.
ExtractToSampleTransformer
(implements net.sf.basedb.util.collections.
CollectionTransformer
<S,D>)
net.sf.basedb.util.overview.validator.
ExtractValidator.TagPosition
net.sf.basedb.util.importer.spotdata.
ExtraFloatParser
net.sf.basedb.core.authentication.
ExtraUserInformation
net.sf.basedb.core.
ExtraValueExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.jep.
ExtraValueFunction
(implements net.sf.basedb.util.jep.
JepExpressionFunction
)
net.sf.basedb.core.
ExtraValueJoin
(implements net.sf.basedb.core.query.
Join
)
net.sf.basedb.util.extensions.manager.
FactoryParametersKey
(implements net.sf.basedb.util.extensions.manager.
ObjectKey
<O>)
net.sf.basedb.util.overview.
Failure
net.sf.basedb.plugins.batchimport.
FallbackIdMethod
(implements net.sf.basedb.plugins.batchimport.
IdMethod
)
net.sf.basedb.core.
Feature
net.sf.basedb.core.
FeatureCoordinate
net.sf.basedb.clients.web.extensions.login.
FieldInfo
net.sf.basedb.util.
FileCopyRunnable
(implements java.lang.Runnable)
net.sf.basedb.plugins.batchimport.
FileImporter.PathIdMethod
(implements net.sf.basedb.plugins.batchimport.
IdMethod
)
net.sf.basedb.util.formatter.
FilePathFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.core.
FileSet.QueryRuntimeFilterImpl
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.
FileSetMember.QueryRuntimeFilterImpl
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.clients.web.plugins.
FileSetMemberLoader
(implements net.sf.basedb.clients.web.plugins.
DataLoader
<T>)
net.sf.basedb.core.log.db.
FileSetMemberLogger
(implements net.sf.basedb.core.log.
EntityLogger
)
net.sf.basedb.util.overview.node.
FileSetMemberNameGenerator
(implements net.sf.basedb.util.overview.node.
NodeNameGenerator
<I>)
net.sf.basedb.core.
FileStoreUtil
net.sf.basedb.core.data.
FileTypeIndex
(implements java.io.Serializable)
net.sf.basedb.clients.web.fileupload.
FileUpload
net.sf.basedb.clients.web.fileupload.
FileUpload.SectionHeaders
net.sf.basedb.clients.web.fileupload.
FileUpload.UploadStatus
net.sf.basedb.clients.web.fileupload.
FileUploadProgress
net.sf.basedb.util.
FileUtil
net.sf.basedb.util.filter.
FilterUtil
net.sf.basedb.util.importer.spotdata.
FirstPassSectionSpotsParser
(implements net.sf.basedb.util.basefile.
BaseFileSectionParser
)
net.sf.basedb.util.overview.
Fix
net.sf.basedb.clients.web.extensions.skin.
FixedSkinActionFactory.MySkinAction
(implements net.sf.basedb.clients.web.extensions.
DynamicActionAttributes
, net.sf.basedb.clients.web.extensions.skin.
SkinAction
)
net.sf.basedb.util.parser.
FlatFileParser
net.sf.basedb.util.parser.
FlatFileParser.Data
net.sf.basedb.util.parser.
FlatFileParser.Line
net.sf.basedb.core.query.
FloatExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.clients.web.formatter.
FormatterFactory
net.sf.basedb.clients.web.formatter.
FormatterSettings
net.sf.basedb.util.jep.
FunctionSafeJep.UnknownFunction
(implements org.nfunk.jep.function.
PostfixMathCommandI
, java.io.Serializable)
net.sf.basedb.util.bfs.
GenericExtraFileImporter
(implements net.sf.basedb.util.bfs.
ExtraFileImporter
)
net.sf.basedb.util.importer.spotdata.
GenericIntensityParser
(implements net.sf.basedb.util.importer.spotdata.
SpotIntensityParser
)
net.sf.basedb.util.overview.
GenericOverview
(implements net.sf.basedb.util.overview.
OverviewContext
)
javax.servlet.
GenericServlet
(implements java.io.Serializable, javax.servlet.
Servlet
, javax.servlet.
ServletConfig
)
javax.servlet.http.
HttpServlet
net.sf.basedb.clients.web.servlet.
CompileAll
net.sf.basedb.clients.web.servlet.
ContentSecurityPolicyReportServlet
net.sf.basedb.clients.web.servlet.
Download
net.sf.basedb.clients.web.servlet.
ExperimentExplorerPlotServlet
net.sf.basedb.clients.web.servlet.
ExtensionsServlet
net.sf.basedb.clients.web.servlet.
PlotServlet
net.sf.basedb.clients.web.servlet.
RssNewsFeed
net.sf.basedb.clients.web.servlet.
Upload
net.sf.basedb.clients.web.servlet.
ViewSpotImage
net.sf.basedb.util.
GeoLocation
net.sf.basedb.util.
GeoLocation.ResponseFilter
(implements net.sf.basedb.core.
AbsoluteProgressReporter
, net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.core.query.
GeometricMeanExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.hibernate.
GetCurrentCatalogWork
(implements org.hibernate.jdbc.
ReturningWork
<T>)
net.sf.basedb.core.
Group.QueryRuntimeFilterImpl
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.data.keyring.
GroupGroups
(implements java.io.Serializable)
net.sf.basedb.core.
GroupPermissions
net.sf.basedb.core.query.
GteqRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.util.gtf.
GtfInputStream.Attribute
net.sf.basedb.util.gtf.
GtfValidationFactory
(implements net.sf.basedb.util.extensions.
ActionFactory
<A>)
net.sf.basedb.core.query.
GtRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.core.plugin.
GuiContext
net.sf.basedb.core.data.
GuiContextData
(implements java.io.Serializable)
net.sf.basedb.util.overview.filter.
HasAttributeFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.core.
HibernateUtil
net.sf.basedb.core.
HibernateUtil.DelayedFilterDef
net.sf.basedb.core.
HibernateUtil.FilterConfigurator
net.sf.basedb.util.plot.
HistogramPlot
net.sf.basedb.util.plot.
HistogramPlot.HistogramBin
(implements java.io.Serializable)
net.sf.basedb.util.plot.
HistogramPlot.HistogramSeries
(implements java.io.Serializable)
net.sf.basedb.util.plot.
HistogramPlot.TempSeries
net.sf.basedb.core.query.
Hql
net.sf.basedb.core.query.
HqlElementsExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.query.
HqlEntityExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.query.
HqlEntityParameterExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.query.
HqlExpression
(implements net.sf.basedb.core.query.
Expression
, net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.core.query.
HqlIndexExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.query.
HqlInnerJoin
(implements net.sf.basedb.core.query.
Join
)
net.sf.basedb.core.query.
HqlLeftJoin
(implements net.sf.basedb.core.query.
Join
)
net.sf.basedb.core.query.
HqlPropertyExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.query.
AnnotationExpression
net.sf.basedb.core.
HqlQueryJoiners
net.sf.basedb.core.
HqlQueryJoiners.AnnotationJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.core.
HqlQueryJoiners.ReporterListJoiner
(implements net.sf.basedb.core.query.
AutoJoiner
<Q,E>)
net.sf.basedb.core.query.
HqlRightJoin
(implements net.sf.basedb.core.query.
Join
)
net.sf.basedb.core.query.
HqlSizeExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.clients.web.util.
HTML
net.sf.basedb.util.uri.http.
HttpConnectionManager
(implements net.sf.basedb.util.uri.
ResumableConnectionManager
)
net.sf.basedb.util.uri.http.
HttpConnectionManagerActionFactory
(implements net.sf.basedb.util.extensions.
ActionFactory
<A>)
net.sf.basedb.util.uri.http.
HttpConnectionManagerFactory
(implements net.sf.basedb.util.uri.
ConnectionManagerFactory
)
net.sf.basedb.util.
HttpUtil
net.sf.basedb.util.formatter.
IdentifiableFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.util.json.
IdentityConverter
<T> (implements net.sf.basedb.util.json.
JsonConverter
<T>)
net.sf.basedb.util.encode.
IdentityEncoderDecoder
(implements net.sf.basedb.util.encode.
EncoderDecoder
)
net.sf.basedb.util.filter.
IdentityFilter
<T> (implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.units.
IdentityUnitConverter
(implements net.sf.basedb.util.units.
UnitConverter
)
net.sf.basedb.util.extensions.manager.processor.
IgnoreFileProcessor
(implements net.sf.basedb.util.extensions.manager.
ExtensionsFileProcessor
)
net.sf.basedb.clients.web.extensions.
IgnoreFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.plugins.
IlluminaRawDataImporter.BatchAndMapHolder
net.sf.basedb.clients.web.servlet.
ImageRemapFilter
(implements javax.servlet.
Filter
)
net.sf.basedb.clients.web.extensions.skin.
ImageRemapper
net.sf.basedb.clients.web.extensions.skin.
ImageRemapperUtil
net.sf.basedb.clients.web.extensions.section.
IncludeContentSectionFactory.Section
(implements net.sf.basedb.clients.web.extensions.section.
SectionAction
)
net.sf.basedb.clients.web.extensions.tabcontrol.
IncludeContentTabFactory.Tab
(implements net.sf.basedb.clients.web.extensions.tabcontrol.
TabAction
)
net.sf.basedb.util.
IncludeExcludeFilter
(implements net.sf.basedb.util.
DynamicFilter
)
net.sf.basedb.util.overview.cache.
IndexedCacheKey
net.sf.basedb.clients.jobagent.handlers.
InfoRequestHandler
(implements net.sf.basedb.util.jobagent.
RequestHandler
)
net.sf.basedb.util.annotations.
InheritAnnotationsManager
net.sf.basedb.util.annotations.
InheritAnnotationsManager.AnnotationTypeFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.annotations.
InheritAnnotationsManager.UsableParentFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.annotations.
InheritSpecification
(implements net.sf.basedb.util.filter.
Filter
<T>)
java.io.InputStream (implements java.io.Closeable)
net.sf.basedb.clients.web.fileupload.
FileUpload.UploadStream
java.io.FilterInputStream
net.sf.basedb.util.uri.
CloseResourceInputStream
net.sf.basedb.core.plugin.
ImportInputStream
net.sf.basedb.util.
FileImportInputStream
net.sf.basedb.core.
Migration.ProgressInputStream
net.sf.basedb.util.
StaticCache.LockSafeInputStream
net.sf.basedb.util.gtf.
GtfInputStream
net.sf.basedb.util.
InputStreamCombiner
net.sf.basedb.util.
InputStreamSplitter
net.sf.basedb.util.
InputStreamTracker
net.sf.basedb.util.
ProgressInputStream
net.sf.basedb.util.jep.
InReporterListFunction
(implements net.sf.basedb.util.jep.
JepRestrictionFunction
)
net.sf.basedb.core.query.
InRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.core.
Install
net.sf.basedb.core.
Install.ItemSubtypeFT
net.sf.basedb.core.
Install.PlatformFT
net.sf.basedb.util.extensions.manager.filter.
InstalledFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.clients.web.extensions.
InstallFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.filter.
InstanceOfFilter
<T> (implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.core.query.
IntegerExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.formatter.
IntegerFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.core.
IntegerUtil
net.sf.basedb.util.
IntensityCalculatorUtil
net.sf.basedb.util.
IntensityCalculatorUtil.JepIntensityCalculatorImpl
(implements net.sf.basedb.util.
IntensityCalculator
)
net.sf.basedb.core.
IntensityFormula
net.sf.basedb.plugins.batchimport.
InternalIdMethod
(implements net.sf.basedb.plugins.batchimport.
IdMethod
)
net.sf.basedb.core.
InternalJobQueue.JobRunner
(implements java.lang.Runnable)
net.sf.basedb.clients.jobagent.slotmanager.
InternalSlotManager
(implements net.sf.basedb.clients.jobagent.slotmanager.
SlotManager
)
net.sf.basedb.clients.jobagent.slotmanager.
MasterSlotManager
net.sf.basedb.core.
InternalStorageController
(implements net.sf.basedb.core.
SecondaryStorageController
)
net.sf.basedb.util.extensions.manager.filter.
InvalidAndModifiedFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.filter.
InverseFilter
<T> (implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.extensions.
InvokationContext
<A>
net.sf.basedb.util.extensions.
ExtensionContext
<A>
net.sf.basedb.util.extensions.
ExtensionPointContext
<A>
net.sf.basedb.core.
Item.DefinedPermissions
net.sf.basedb.core.
ItemContext
net.sf.basedb.core.
ItemContext.PropertyFilterPair
net.sf.basedb.core.
ItemList.DelayedAdditionManager
(implements net.sf.basedb.core.
TransactionalAction
)
net.sf.basedb.util.overview.node.
ItemListMemberNameGenerator
(implements net.sf.basedb.util.overview.node.
NodeNameGenerator
<I>)
net.sf.basedb.core.
ItemProxy
(implements java.lang.Comparable<T>)
net.sf.basedb.clients.web.plugins.
ItemQueryLoader
<T> (implements net.sf.basedb.clients.web.plugins.
DataLoader
<T>)
net.sf.basedb.clients.web.plugins.
ParentBioMaterialLoader
net.sf.basedb.clients.web.plugins.
ItemQueryWrapper
(implements net.sf.basedb.clients.web.plugins.
QueryWrapper
<T>)
net.sf.basedb.core.
ItemResultIterator
<I> (implements net.sf.basedb.core.query.
ResultIterator
<I>)
net.sf.basedb.core.
ItemResultList.ResultListIterator
<T> (implements java.util.Iterator<E>)
net.sf.basedb.core.
ItemResultList.ResultListListIterator
<T> (implements java.util.ListIterator<E>)
net.sf.basedb.util.overview.filter.
ItemTypeFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.formatter.
ItemTypeFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.util.
JarClassLoader.JarClassLoaderProxy
net.sf.basedb.util.
JarClassLoader.JarInfo
net.sf.basedb.util.jep.
Jep
org.nfunk.jep.
JEP
net.sf.basedb.util.jep.
FunctionSafeJep
net.sf.basedb.util.export.spotdata.
JepDynamicField
(implements net.sf.basedb.util.export.spotdata.
DynamicField
)
net.sf.basedb.util.parser.
JepMapper
(implements net.sf.basedb.util.parser.
Mapper
)
net.sf.basedb.core.
Job.JobSignalTransporter
(implements net.sf.basedb.core.signal.
SignalTransporter
)
net.sf.basedb.core.
Job.ProgressReporterImpl
(implements net.sf.basedb.core.
ProgressReporter
)
net.sf.basedb.util.jobagent.
JobAgentConnection
net.sf.basedb.util.jobagent.
JobAgentInfo
net.sf.basedb.util.jobagent.
JobAgentServerConnection
net.sf.basedb.util.jobagent.
JobAgentServerConnection.ListenerThread
(implements java.lang.Runnable)
net.sf.basedb.util.jobagent.
JobAgentServerConnection.RequestHandlerThread
(implements java.lang.Runnable)
net.sf.basedb.util.jobagent.
JobInfo
net.sf.basedb.clients.jobagent.
JobRunner
(implements java.lang.Runnable)
net.sf.basedb.util.json.
JsonUtil
net.sf.basedb.core.data.keyring.
KeyPermission
(implements java.lang.Comparable<T>)
net.sf.basedb.core.data.keyring.
GroupKeys
(implements java.io.Serializable)
net.sf.basedb.core.data.keyring.
ProjectKeys
(implements java.io.Serializable)
net.sf.basedb.core.data.keyring.
RoleKeys
(implements java.io.Serializable)
net.sf.basedb.core.data.keyring.
UserKeys
(implements java.io.Serializable)
net.sf.basedb.core.
Keyring
net.sf.basedb.core.
InternalJobQueue.JobQueueKeyring
net.sf.basedb.core.
InternalStorageController.StorageKeyring
net.sf.basedb.core.
Job.SignalKeyring
net.sf.basedb.core.
ServiceSessionControl.ServicesKeyring
net.sf.basedb.util.jep.
LeftFunction
(implements net.sf.basedb.util.jep.
JepFunction
)
net.sf.basedb.core.query.
LikeRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.util.units.
LinearUnitConverter
(implements net.sf.basedb.util.units.
UnitConverter
)
net.sf.basedb.util.parser.
LineNoFunction
(implements net.sf.basedb.util.jep.
JepFunction
)
net.sf.basedb.clients.web.formatter.
LinkedItemFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.util.listable.
ListableUtil
net.sf.basedb.clients.web.extensions.list.
ListColumnDataLoader
<I> (implements net.sf.basedb.clients.web.plugins.
DataLoader
<T>)
net.sf.basedb.clients.web.extensions.list.
ListColumnExportRenderer
<I> (implements net.sf.basedb.util.extensions.
Renderer
<A>)
net.sf.basedb.clients.web.extensions.list.
ListColumnUtil
net.sf.basedb.util.
ListUtil
net.sf.basedb.util.biomaterial.
ListUtil
net.sf.basedb.clients.web.extensions.
LoadServletsProcessor
(implements net.sf.basedb.util.extensions.manager.
ExtensionsFileProcessor
)
net.sf.basedb.util.jep.
Log2Function
(implements net.sf.basedb.util.jep.
JepExpressionFunction
)
net.sf.basedb.core.
LogControl
net.sf.basedb.core.query.
LogExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.extensions.
LoggingErrorHandlerFactory
(implements net.sf.basedb.util.extensions.
ErrorHandler
<A>, net.sf.basedb.util.extensions.
ErrorHandlerFactory
<A>)
net.sf.basedb.util.extensions.
RethrowErrorHandlerFactory
net.sf.basedb.core.log.
LoggingInterceptor.LogDetails
net.sf.basedb.core.log.
LoggingInterceptor.LogManagerAndFactory
net.sf.basedb.clients.web.extensions.login.
LoginFormBean
(implements net.sf.basedb.clients.web.extensions.login.
LoginFormAction
)
net.sf.basedb.core.authentication.
LoginRequest
net.sf.basedb.core.
LogUtil
net.sf.basedb.util.formatter.
LookupFormatter
<T> (implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.plugins.
LowessNormalization.CallableWorker
(implements java.util.concurrent.Callable<V>)
net.sf.basedb.plugins.
LowessNormalization.SpotData
(implements java.lang.Comparable<T>)
net.sf.basedb.core.query.
LteqRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.core.query.
LtRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.util.ma.
MACalculator
net.sf.basedb.util.ma.
Log10MACalculator
net.sf.basedb.util.ma.
Log2MACalculator
net.sf.basedb.core.log.db.
ManualEntryLogger
(implements net.sf.basedb.core.log.
EntityLogger
)
net.sf.basedb.core.log.
ManualLogEntry
(implements net.sf.basedb.core.data.
LoggableData
)
net.sf.basedb.util.importer.spotdata.
MAParser
(implements net.sf.basedb.util.importer.spotdata.
SpotIntensityParser
)
net.sf.basedb.core.data.
MappingCoordinate
(implements java.io.Serializable)
net.sf.basedb.clients.web.plugins.
MapValueLoader
(implements net.sf.basedb.clients.web.plugins.
DataLoader
<T>)
net.sf.basedb.util.extensions.manager.processor.
MarkAsProcessedProcessor
(implements net.sf.basedb.util.extensions.manager.
ExtensionsFileProcessor
)
net.sf.basedb.clients.web.extensions.
InstalledFileProcessor
net.sf.basedb.clients.jobagent.slotmanager.
MasterSlotManager.RemoteSlot
net.sf.basedb.clients.jobagent.slotmanager.
MasterSlotManager.RemoteSlotRequestHandler
(implements net.sf.basedb.util.jobagent.
RequestHandler
)
net.sf.basedb.util.bfs.
MatrixModel
(implements net.sf.basedb.util.bfs.
EventHandler
)
net.sf.basedb.util.importer.spotdata.
MatrixSpotIntensityEventHandler
(implements net.sf.basedb.util.bfs.
EventHandler
)
net.sf.basedb.core.query.
MaxExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.
MD5
net.sf.basedb.core.query.
MeanExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.jep.
MeanFunction
(implements net.sf.basedb.util.jep.
JepExpressionFunction
)
net.sf.basedb.core.
MeanRawDataPropertyExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.
MeasuredBioMaterial.RemainingQuantityAction
(implements net.sf.basedb.core.
TransactionalAction
)
net.sf.basedb.plugins.
MedianRatioNormalization.SpotData
(implements java.lang.Comparable<T>)
net.sf.basedb.core.
Metadata
<C>
net.sf.basedb.core.
Metadata.BasicData2ItemPropertyPath
<C,V> (implements net.sf.basedb.core.
Metadata.PropertyPath
<C,V>)
net.sf.basedb.core.
Metadata.BasicItem2DataPropertyPath
<C,V> (implements net.sf.basedb.core.
Metadata.PropertyPath
<C,V>)
net.sf.basedb.core.
Metadata.CollectionPropertyPath
<C> (implements net.sf.basedb.core.
Metadata.PropertyPath
<C,V>)
net.sf.basedb.core.
Metadata.CombinedPropertyPath
<C,V> (implements net.sf.basedb.core.
Metadata.PropertyPath
<C,V>)
net.sf.basedb.core.
Metadata.ComponentPropertyPath
<C,V> (implements net.sf.basedb.core.
Metadata.PropertyPath
<C,V>)
net.sf.basedb.core.
Metadata.DateCopyPropertyPath
(implements net.sf.basedb.core.
Metadata.PropertyPath
<C,V>)
net.sf.basedb.core.
Metadata.EntityPropertyPath
<C,V> (implements net.sf.basedb.core.
Metadata.PropertyPath
<C,V>)
net.sf.basedb.core.
Metadata.EvictPropertyPath
<C> (implements net.sf.basedb.core.
Metadata.PropertyPath
<C,V>)
net.sf.basedb.core.
Metadata.IdentifierPropertyPath
(implements net.sf.basedb.core.
Metadata.PropertyPath
<C,V>)
net.sf.basedb.core.
Metadata.MapPropertyPath
(implements net.sf.basedb.core.
Metadata.PropertyPath
<C,V>)
net.sf.basedb.core.
Metadata.NoopPropertyPath
<C> (implements net.sf.basedb.core.
Metadata.PropertyPath
<C,V>)
net.sf.basedb.core.
Metadata.ReporterScore2DataPropertyPath
(implements net.sf.basedb.core.
Metadata.PropertyPath
<C,V>)
net.sf.basedb.util.bfs.
MetadataModel
(implements net.sf.basedb.util.bfs.
EventHandler
)
net.sf.basedb.util.bfs.
MetadataModel.Section
net.sf.basedb.util.bfs.
MetadataModel.SectionEntry
net.sf.basedb.util.bfs.
MetadataParser
(implements net.sf.basedb.util.bfs.
BfsParser
)
net.sf.basedb.core.
Migration
(implements org.hibernate.jdbc.
Work
)
net.sf.basedb.core.query.
MinExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.clients.web.
ModeInfo
net.sf.basedb.util.bfs.
MultiEventHandler
(implements net.sf.basedb.util.bfs.
EventHandler
)
net.sf.basedb.util.formatter.
MultiFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.core.
MultiPermissions
net.sf.basedb.core.query.
MultiplyExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.plugins.batchimport.
MultiPropertyIdMethod
(implements net.sf.basedb.plugins.batchimport.
IdMethod
)
net.sf.basedb.clients.jobagent.handlers.
MultiProtocolRequestHandler
(implements net.sf.basedb.util.jobagent.
RequestHandler
)
net.sf.basedb.util.query.
MultiQueryIterator
<E> (implements java.util.Iterator<E>)
net.sf.basedb.util.collections.
MultiStepCollectionTransformer
<S,D> (implements net.sf.basedb.util.collections.
CollectionTransformer
<S,D>)
net.sf.basedb.core.hibernate.
MultiUpdateWork
(implements org.hibernate.jdbc.
Work
)
net.sf.basedb.util.
NameableComparator
<T> (implements java.util.Comparator<T>, java.io.Serializable)
net.sf.basedb.util.json.
NameableConverter
<T> (implements net.sf.basedb.util.json.
JsonConverter
<T>)
net.sf.basedb.util.formatter.
NameableFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.util.overview.node.
NameableNameGenerator
<I> (implements net.sf.basedb.util.overview.node.
NodeNameGenerator
<I>)
net.sf.basedb.util.overview.node.
BioPlateNameGenerator
net.sf.basedb.util.overview.node.
ExtractNameGenerator
net.sf.basedb.core.
NameableUtil
net.sf.basedb.core.plugin.
NamespaceParameterValuesWrapper
(implements net.sf.basedb.core.plugin.
ParameterValues
)
net.sf.basedb.core.plugin.
NamespaceRequestWrapper
(implements net.sf.basedb.core.plugin.
Request
)
net.sf.basedb.core.query.
NegateExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.query.
NeqRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.util.
NestedIterator
<E> (implements java.util.Iterator<E>)
net.sf.basedb.core.
News.QueryRuntimeFilterImpl
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.clients.web.formatter.
NiceFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.util.overview.
Node
(implements java.lang.Comparable<T>)
net.sf.basedb.util.overview.
NodeAttribute
<T>
net.sf.basedb.util.overview.cache.
NodeCache
<K>
net.sf.basedb.util.overview.node.
NodeFactory
<I>
net.sf.basedb.util.filter.
NoneOfFilter
<T> (implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.jep.
NotInReporterListFunction
(implements net.sf.basedb.util.jep.
JepRestrictionFunction
)
net.sf.basedb.util.filter.
NotNullFilter
<T> (implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.core.query.
NotRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.util.parser.
NullIfExceptionMapper
(implements net.sf.basedb.util.parser.
Mapper
)
net.sf.basedb.util.overview.loader.
NullNodeLoader
<I> (implements net.sf.basedb.util.overview.loader.
NodeLoader
<I>)
net.sf.basedb.util.overview.validator.
NullNodeValidator
<I> (implements net.sf.basedb.util.overview.validator.
NodeValidator
<I>)
net.sf.basedb.util.formatter.
NumberFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.util.formatter.
AdaptiveNumberFormatter
net.sf.basedb.util.
NumberFormatUtil
net.sf.basedb.core.authentication.
OldAuthenticationWrapperFactory
(implements net.sf.basedb.util.extensions.
ActionFactory
<A>)
net.sf.basedb.core.authentication.
OldAuthenticationWrapperFactory.OldAuthenticationManager
(implements net.sf.basedb.core.authentication.
AuthenticationManager
)
net.sf.basedb.util.
OlderThanFileFilter
(implements java.io.FileFilter)
net.sf.basedb.util.filter.
OneOfFilter
<T> (implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.clients.web.extensions.edit.
OnSaveRenderer
(implements net.sf.basedb.util.extensions.
Renderer
<A>)
net.sf.basedb.core.query.
Orders
net.sf.basedb.core.query.
OrRestriction
(implements net.sf.basedb.core.query.
Restriction
)
java.io.OutputStream (implements java.io.Closeable, java.io.Flushable)
net.sf.basedb.core.plugin.
ExportOutputStream
net.sf.basedb.util.
FileExportOutputStream
net.sf.basedb.clients.web.util.
ServletExportOutputStream
java.io.FilterOutputStream
java.io.BufferedOutputStream
net.sf.basedb.core.
File.UploadStream
net.sf.basedb.util.
StaticCache.LockSafeOutputStream
net.sf.basedb.clients.web.extensions.plot.
OverviewPlotBean
(implements net.sf.basedb.clients.web.extensions.plot.
OverviewPlotAction
)
net.sf.basedb.util.overview.
OverviewUtil
net.sf.basedb.core.
OwnableUtil
net.sf.basedb.util.
OwnableUtil
net.sf.basedb.util.zip.
PackUtil
net.sf.basedb.plugins.executor.
ParameterDefinition
net.sf.basedb.core.query.
ParameterExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.
ParameterInfo
net.sf.basedb.plugins.util.
Parameters
net.sf.basedb.core.
ParameterType
<T>
net.sf.basedb.core.
BooleanParameterType
net.sf.basedb.core.
DateParameterType
net.sf.basedb.core.
DoubleParameterType
net.sf.basedb.core.
FileParameterType
net.sf.basedb.core.
FloatParameterType
net.sf.basedb.core.
IntegerParameterType
net.sf.basedb.core.
ItemParameterType
<T>
net.sf.basedb.core.
LongParameterType
net.sf.basedb.core.
PathParameterType
net.sf.basedb.core.
StringParameterType
net.sf.basedb.core.
PasswordParameterType
net.sf.basedb.core.
TimestampParameterType
net.sf.basedb.core.
ParameterValuesImpl
(implements net.sf.basedb.core.plugin.
ParameterValues
)
net.sf.basedb.core.plugin.
ParameterValuesWrapper
(implements net.sf.basedb.core.plugin.
ParameterValues
)
net.sf.basedb.clients.web.plugins.
ParentBioMaterialEventSourceLoader
(implements net.sf.basedb.clients.web.plugins.
DataLoader
<T>)
net.sf.basedb.clients.web.plugins.
ParentBioMaterialEventSourceLoaderFromBioAssay
(implements net.sf.basedb.clients.web.plugins.
DataLoader
<T>)
net.sf.basedb.util.biomaterial.
ParentsTransformer
<I> (implements net.sf.basedb.util.collections.
CollectionTransformer
<S,D>)
net.sf.basedb.core.
Path
net.sf.basedb.util.extensions.xml.
PathConverter
(implements net.sf.basedb.util.extensions.xml.
ValueConverter
)
net.sf.basedb.clients.web.plugins.
PathLoader
(implements net.sf.basedb.clients.web.plugins.
DataLoader
<T>)
net.sf.basedb.clients.jobagent.handlers.
PauseRequestHandler
(implements net.sf.basedb.util.jobagent.
RequestHandler
)
net.sf.basedb.util.timer.
PerformanceTimer
net.sf.basedb.core.query.
PermissionRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.core.plugin.
Permissions
net.sf.basedb.clients.web.
PermissionUtil
net.sf.basedb.clients.jobagent.handlers.
PingRequestHandler
(implements net.sf.basedb.util.jobagent.
RequestHandler
)
net.sf.basedb.clients.web.plugins.
PlainTextTemplate
(implements net.sf.basedb.clients.web.plugins.
ExportTemplate
)
net.sf.basedb.core.data.
PlateCoordinate
(implements java.io.Serializable)
net.sf.basedb.core.log.db.
PlateEventLogger
(implements net.sf.basedb.core.log.
EntityLogger
)
net.sf.basedb.util.plot.
PlotAnnotation
(implements java.lang.Comparable<T>)
net.sf.basedb.clients.web.extensions.plot.
PlotGeneratorBean
(implements net.sf.basedb.clients.web.extensions.plot.
PlotGenerator
)
net.sf.basedb.clients.web.servlet.
PlotServlet.CFResultIterator
(implements net.sf.basedb.core.query.
SqlResultIterator
)
net.sf.basedb.clients.web.servlet.
PlotServlet.CFSqlResult
(implements net.sf.basedb.core.query.
SqlResult
)
net.sf.basedb.util.extensions.xml.
PluginDefinitionFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.extensions.xml.
PluginInfo
net.sf.basedb.util.extensions.manager.
PluginInfoKey
(implements net.sf.basedb.util.extensions.manager.
ObjectKey
<O>)
net.sf.basedb.util.extensions.manager.processor.
PluginInstallationProcessor
(implements net.sf.basedb.util.extensions.manager.
ExtensionsFileProcessor
)
net.sf.basedb.core.data.keyring.
PluginKeys
(implements java.lang.Comparable<T>, java.io.Serializable)
net.sf.basedb.core.
PluginParameter
<T>
net.sf.basedb.core.plugin.
NamespacePluginParameter
<T>
net.sf.basedb.core.
PluginPermission
net.sf.basedb.core.data.
PluginPermission
net.sf.basedb.core.
PluginRequest
<P>
net.sf.basedb.core.
PluginConfigurationRequest
net.sf.basedb.core.
PluginExecutionRequest
(implements java.lang.Runnable)
net.sf.basedb.core.
PluginRequest.RequestImpl
(implements net.sf.basedb.core.plugin.
Request
)
net.sf.basedb.core.
PluginResponse
net.sf.basedb.core.
PluginResponse.ResponseImpl
(implements net.sf.basedb.core.plugin.
Response
)
net.sf.basedb.core.authentication.
POP3Authenticator
(implements net.sf.basedb.core.authentication.
Authenticator
)
net.sf.basedb.util.importer.spotdata.
PositionEventHandler
(implements net.sf.basedb.util.bfs.
EventHandler
)
net.sf.basedb.util.jep.
PositionFunction
(implements net.sf.basedb.util.jep.
JepExpressionFunction
)
net.sf.basedb.core.migrate.postgres.
PostgresResultWriterFactory
(implements net.sf.basedb.core.migrate.
ResultWriterFactory
)
net.sf.basedb.core.query.
PowerExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.
PredefinedQuery
net.sf.basedb.util.formatter.
PrefixSuffixFormatter
<T> (implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.clients.web.extensions.renderer.
PrefixSuffixRenderer
<A> (implements net.sf.basedb.util.extensions.
WrappingRenderer
<A>)
net.sf.basedb.core.
Presets
(implements java.lang.Iterable<T>)
net.sf.basedb.core.
Presets.Preset
(implements java.lang.Iterable<T>)
net.sf.basedb.plugins.
PrintMapFlatFileImporter.MetaBlock
net.sf.basedb.util.
PriorityComparator
<T> (implements java.util.Comparator<T>)
net.sf.basedb.clients.jobagent.executors.
ProcessJobExecutor
(implements net.sf.basedb.clients.jobagent.
JobExecutor
)
net.sf.basedb.clients.jobagent.executors.
ProcessJobExecutor.StreamRedirector
(implements java.lang.Runnable)
net.sf.basedb.util.extensions.manager.
ProcessResults
net.sf.basedb.util.extensions.manager.
ProcessResults.FileResults
net.sf.basedb.plugins.executor.
ProgramParameter
net.sf.basedb.core.
Project.QueryRuntimeFilterImpl
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.data.keyring.
ProjectPermission
(implements java.lang.Comparable<T>)
net.sf.basedb.core.data.keyring.
GroupProjects
(implements java.io.Serializable)
net.sf.basedb.core.data.keyring.
UserProjects
(implements java.io.Serializable)
net.sf.basedb.core.
ProjectPermissions
net.sf.basedb.core.
ProjectSpecificAnnotationsManager
(implements net.sf.basedb.core.
TransactionalAction
)
net.sf.basedb.core.
ProjectSpecificAnnotationsManager.AnnotationInfo
net.sf.basedb.clients.web.util.
ProjectSpecificInfoFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.core.
PropertyFilter
net.sf.basedb.core.data.
PropertyFilterData
net.sf.basedb.util.formatter.
PropertyFilterFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.plugins.batchimport.
PropertyIdMethod
(implements net.sf.basedb.plugins.batchimport.
IdMethod
)
net.sf.basedb.util.extensions.debug.
ProxyActionFactory
(implements net.sf.basedb.util.extensions.
ActionFactory
<A>, java.lang.reflect.InvocationHandler)
net.sf.basedb.core.query.
QuadraticMeanExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.
QueryExecutor
net.sf.basedb.core.
QueryExecutor.CancelableSession
(implements net.sf.basedb.core.
QueryExecutor.Cancelable
)
net.sf.basedb.core.
QueryExecutor.CancelableStatelessSession
(implements net.sf.basedb.core.
QueryExecutor.Cancelable
)
net.sf.basedb.core.
QueryExecutor.CancelableStatement
(implements net.sf.basedb.core.
QueryExecutor.Cancelable
)
net.sf.basedb.core.
QueryExecutor.FutureItem
<T> (implements java.util.concurrent.Callable<V>)
net.sf.basedb.core.
QueryExecutor.FutureResultSet
(implements java.util.concurrent.Callable<V>)
net.sf.basedb.core.
QueryExecutor.FutureScrollIterator
<T> (implements java.util.concurrent.Callable<V>)
net.sf.basedb.core.
QueryExecutor.FutureUpdate
(implements java.util.concurrent.Callable<V>)
net.sf.basedb.core.query.
QueryParameter
net.sf.basedb.util.
QueryParameters
net.sf.basedb.core.
QueryRuntimeFilterFactory
net.sf.basedb.core.
QueryRuntimeFilterFactory.AnnotatableFilter
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.
QueryRuntimeFilterFactory.BasicFilter
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.
QueryRuntimeFilterFactory.ChainedFilter
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.
QueryRuntimeFilterFactory.ChildFilter
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.
QueryRuntimeFilterFactory.DenyAllFilter
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.
QueryRuntimeFilterFactory.OwnableFilter
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.
QueryRuntimeFilterFactory.RemovableFilter
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.
QueryRuntimeFilterFactory.ShareableFilter
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.
QueryRuntimeFilterManager
net.sf.basedb.core.hibernate.
QueryWrapper
<R> (implements org.hibernate.query.
Query
<R>)
net.sf.basedb.core.hibernate.
EntityQueryWrapper
<R>
net.sf.basedb.core.hibernate.
NativeQueryWrapper
<R> (implements org.hibernate.query.
NativeQuery
<T>)
net.sf.basedb.core.
Quota.QueryRuntimeFilterImpl
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.data.
QuotaIndex
(implements java.io.Serializable)
net.sf.basedb.core.
RawBioAssayPropertyExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.jep.
RawChannelFunction
(implements net.sf.basedb.util.jep.
JepExpressionFunction
)
net.sf.basedb.core.
RawDataBatcher.FeatureInfo
net.sf.basedb.plugins.
RawDataFlatFileImporter.FileIterator
(implements java.util.Iterator<E>)
net.sf.basedb.core.
RawDataPropertyExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.
RawDataType
(implements java.lang.Comparable<T>)
net.sf.basedb.core.
RawDataTypes
net.sf.basedb.core.
RawDataTypes.NameComparator
(implements java.util.Comparator<T>)
net.sf.basedb.core.
RawDataUtil
net.sf.basedb.util.jep.
RawFunction
(implements net.sf.basedb.util.jep.
JepExpressionFunction
)
net.sf.basedb.core.
RealJoin
(implements net.sf.basedb.core.query.
Join
)
net.sf.basedb.core.
RealTable
net.sf.basedb.util.overview.extensions.
ReflectValidationRuleActionFactory
(implements net.sf.basedb.util.extensions.
ActionFactory
<A>)
net.sf.basedb.util.
RegexpFileFilter
(implements java.io.FileFilter)
net.sf.basedb.util.extensions.manager.processor.
RegisterExtensionsProcessor
(implements net.sf.basedb.util.extensions.manager.
ExtensionsFileProcessor
)
net.sf.basedb.clients.web.extensions.
WebClientRegisterExtensionsProcessor
net.sf.basedb.util.extensions.manager.processor.
RegisterExtensionsProcessor.FileData
net.sf.basedb.util.extensions.
Registry
net.sf.basedb.util.extensions.
Registry.AttributeKey
net.sf.basedb.util.extensions.
Registry.RegisteredAbout
(implements net.sf.basedb.core.plugin.
About
, net.sf.basedb.util.extensions.
ExtendedAbout
)
net.sf.basedb.util.extensions.
Registry.RegisteredEventHandler
net.sf.basedb.util.extensions.
Registry.RegisteredExtension
<A> (implements net.sf.basedb.util.extensions.
Extension
<A>)
net.sf.basedb.util.extensions.
Registry.RegisteredExtensionPoint
<A> (implements net.sf.basedb.util.extensions.
ExtensionPoint
<A>)
net.sf.basedb.clients.jobagent.slotmanager.
RemoteSlotManager
(implements net.sf.basedb.clients.jobagent.slotmanager.
SlotManager
)
net.sf.basedb.util.
RemovableUtil
net.sf.basedb.util.collections.
RemoveAllTransformer
<I> (implements net.sf.basedb.util.collections.
CollectionTransformer
<S,D>)
net.sf.basedb.core.
Reporter
net.sf.basedb.core.data.
ReporterClonePropertyData
net.sf.basedb.util.jep.
ReporterFunction
(implements net.sf.basedb.util.jep.
JepExpressionFunction
)
net.sf.basedb.core.query.
ReporterListExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.
ReporterListJoin
(implements net.sf.basedb.core.query.
Join
)
net.sf.basedb.core.data.
ReporterListScoreData
(implements java.io.Serializable)
net.sf.basedb.core.
ReporterPropertyExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.
ReporterScore
net.sf.basedb.clients.web.plugins.
ReporterScoreQueryWrapper
(implements net.sf.basedb.clients.web.plugins.
QueryWrapper
<T>)
net.sf.basedb.core.
ReporterScoreResultIterator
(implements net.sf.basedb.core.query.
ResultIterator
<I>)
net.sf.basedb.core.
RequestInformation
net.sf.basedb.util.extensions.manager.processor.
ResetErrorFlagProcessor
(implements net.sf.basedb.util.extensions.manager.
ExtensionsFileProcessor
)
net.sf.basedb.util.fileset.
ResetMetadataRenderer
(implements net.sf.basedb.util.extensions.
Renderer
<A>)
net.sf.basedb.util.extensions.manager.processor.
ResetProcessor
(implements net.sf.basedb.util.extensions.manager.
ExtensionsFileProcessor
)
java.util.ResourceBundle.Control
net.sf.basedb.util.resources.
Utf8PropertiesResourceBundleControl
net.sf.basedb.util.resources.
ResourceBundleFactory
net.sf.basedb.util.resources.
ResourceBundleWrapper
net.sf.basedb.clients.web.extensions.service.
RestartServiceRenderer
(implements net.sf.basedb.util.extensions.
Renderer
<A>)
net.sf.basedb.core.query.
Restrictions
net.sf.basedb.core.hibernate.
ResultSetWork
<R> (implements org.hibernate.jdbc.
ReturningWork
<T>)
net.sf.basedb.core.
AbstractSqlQuery.CountWork
net.sf.basedb.core.query.
ReturnClassFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.core.query.
RlikeRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.core.
Role.QueryRuntimeFilterImpl
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.util.annotations.
RunnableInheritAnnotationsManager
(implements java.lang.Runnable)
net.sf.basedb.util.biomaterial.
SampleToBioSourceTransformer
(implements net.sf.basedb.util.collections.
CollectionTransformer
<S,D>)
net.sf.basedb.util.biomaterial.
SampleToExtractTransformer
(implements net.sf.basedb.util.collections.
CollectionTransformer
<S,D>)
net.sf.basedb.core.hibernate.
SavePointWork
<R> (implements org.hibernate.jdbc.
ReturningWork
<T>)
net.sf.basedb.util.plot.
ScatterPlot
net.sf.basedb.util.timer.
Scheduler
net.sf.basedb.core.hibernate.
SchemaExistsWork
(implements org.hibernate.jdbc.
ReturningWork
<T>)
net.sf.basedb.core.hibernate.
SchemaGenerator
(implements org.hibernate.jdbc.
Work
)
net.sf.basedb.core.hibernate.
SchemaGenerator.CollectSqlTarget
(implements org.hibernate.tool.schema.spi.
ExecutionOptions
, org.hibernate.tool.schema.spi.
ScriptTargetOutput
, org.hibernate.tool.schema.spi.
SourceDescriptor
, org.hibernate.tool.schema.spi.
TargetDescriptor
)
net.sf.basedb.core.hibernate.
SchemaGenerator.SqlStatement
net.sf.basedb.util.jep.
ScoreFunction
(implements net.sf.basedb.util.jep.
JepExpressionFunction
)
net.sf.basedb.core.
ScrollIterator
<E> (implements java.util.Iterator<E>)
net.sf.basedb.util.importer.spotdata.
SecondPassSectionSpotsParser
(implements net.sf.basedb.util.basefile.
BaseFileSectionParser
)
net.sf.basedb.util.importer.spotdata.
SectionAssaysParser
(implements net.sf.basedb.util.basefile.
BaseFileSectionParser
)
net.sf.basedb.clients.web.extensions.section.
SectionBean
(implements net.sf.basedb.clients.web.extensions.section.
SectionAction
)
net.sf.basedb.util.importer.spotdata.
SectionReporterListParser
(implements net.sf.basedb.util.basefile.
BaseFileSectionParser
)
net.sf.basedb.core.query.
SelectedExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.query.
Selects
net.sf.basedb.util.bfs.
SequenceFilenameGenerator
(implements net.sf.basedb.util.bfs.
FilenameGenerator
<T>)
net.sf.basedb.util.importer.spotdata.
SerialSpotIntensityEventHandler
(implements net.sf.basedb.util.bfs.
EventHandler
)
net.sf.basedb.clients.web.extensions.service.
Services
net.sf.basedb.core.
ServiceSessionControl.FlushSessionAction
(implements net.sf.basedb.core.
TransactionalAction
)
net.sf.basedb.core.
ServiceSessionControl.SessionFactoryConfiguration
net.sf.basedb.clients.web.extensions.service.
ServicesEventHandler
(implements net.sf.basedb.util.extensions.events.
EventHandler
)
net.sf.basedb.core.
ServicesUtil
net.sf.basedb.clients.web.extensions.
ServletLoader
javax.servlet.
ServletRequestWrapper
(implements javax.servlet.
ServletRequest
)
javax.servlet.http.
HttpServletRequestWrapper
(implements javax.servlet.http.
HttpServletRequest
)
net.sf.basedb.clients.web.extensions.
RequestWrapper
net.sf.basedb.clients.web.extensions.
ServletWrapper
(implements javax.servlet.
ServletConfig
)
net.sf.basedb.clients.web.extensions.
ServletWrapperKey
(implements net.sf.basedb.util.extensions.manager.
ObjectKey
<O>)
net.sf.basedb.core.
SessionControl
net.sf.basedb.core.
PluginSessionControl
net.sf.basedb.core.
ServiceSessionControl
net.sf.basedb.core.
SessionControl.LoginInfo
net.sf.basedb.core.
SessionControl.SettingInfo
net.sf.basedb.core.
SessionControl.UnverifiedDeviceInfo
net.sf.basedb.core.hibernate.
SessionFactoryConfiguration
net.sf.basedb.core.
ShareableUtil
net.sf.basedb.util.
ShareableUtil
net.sf.basedb.core.query.
SharedToRestriction
(implements net.sf.basedb.core.query.
Restriction
)
net.sf.basedb.core.signal.
ShutdownSignalSender
(implements net.sf.basedb.core.signal.
SignalSender
)
net.sf.basedb.core.signal.
Signal
net.sf.basedb.clients.jobagent.handlers.
SignalRequestHandler
(implements net.sf.basedb.util.jobagent.
RequestHandler
)
net.sf.basedb.core.authentication.
SimpleAuthenticator
(implements net.sf.basedb.core.authentication.
Authenticator
)
net.sf.basedb.util.export.spotdata.
SimpleDynamicField
(implements net.sf.basedb.util.export.spotdata.
DynamicField
)
net.sf.basedb.util.error.
SimpleErrorHandler
(implements net.sf.basedb.util.error.
ErrorHandler
)
net.sf.basedb.util.jep.
SimpleJepFunction
(implements net.sf.basedb.util.jep.
JepFunction
)
net.sf.basedb.core.
SimpleProgressReporter
(implements net.sf.basedb.core.
ProgressReporter
)
net.sf.basedb.core.
SimpleAbsoluteProgressReporter
(implements net.sf.basedb.core.
AbsoluteProgressReporter
)
net.sf.basedb.clients.web.util.
SimpleSignalProgressReporter
(implements net.sf.basedb.core.signal.
SignalReceiver
)
net.sf.basedb.core.signal.
SimpleSignalSender
(implements net.sf.basedb.core.signal.
SignalSender
)
net.sf.basedb.util.extensions.
SingleExtensionFilter
(implements net.sf.basedb.util.extensions.
ExtensionsFilter
)
net.sf.basedb.util.fileset.
SingleFileValidationAction
(implements net.sf.basedb.util.fileset.
ValidationAction
)
net.sf.basedb.util.affymetrix.
CdfValidationAction
net.sf.basedb.util.affymetrix.
CelValidationAction
net.sf.basedb.util.gtf.
GtfValidationAction
net.sf.basedb.clients.jobagent.slotmanager.
Slot
net.sf.basedb.core.snapshot.
SnapshotManager
net.sf.basedb.core.signal.
SocketSignalReceiver.ListenerThread
(implements java.lang.Runnable)
net.sf.basedb.util.
SocketUtil
net.sf.basedb.util.listable.
SourceItemTransformerChain
(implements net.sf.basedb.util.listable.
SourceItemTransformer
)
net.sf.basedb.core.
SpotImage
net.sf.basedb.clients.web.formatter.
SpotImageFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.core.query.
SqlColumnExpression
(implements net.sf.basedb.core.query.
Expression
)
org.hibernate.dialect.function.
SQLFunctionTemplate
(implements org.hibernate.dialect.function.
SQLFunction
)
net.sf.basedb.core.hibernate.
NativeSQLFunction
net.sf.basedb.core.query.
SqrtExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.ssl.
SSLUtil2
net.sf.basedb.clients.web.extensions.startpage.
StartPageBean
(implements net.sf.basedb.clients.web.extensions.startpage.
StartPageAction
)
net.sf.basedb.clients.jobagent.handlers.
StartRequestHandler
(implements net.sf.basedb.util.jobagent.
RequestHandler
)
net.sf.basedb.clients.web.extensions.service.
StartServiceRenderer
(implements net.sf.basedb.util.extensions.
Renderer
<A>)
net.sf.basedb.clients.web.servlet.
StartStopServlet
(implements javax.servlet.
ServletContextListener
)
net.sf.basedb.util.
StaticCache
net.sf.basedb.util.
StaticCache.LockEntry
(implements java.util.concurrent.locks.ReadWriteLock)
net.sf.basedb.util.filter.
StaticFilter
<T> (implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.ssl.
StaticKeyManager
(implements javax.net.ssl.X509KeyManager)
net.sf.basedb.clients.jobagent.handlers.
StopRequestHandler
(implements net.sf.basedb.util.jobagent.
RequestHandler
)
net.sf.basedb.clients.web.extensions.service.
StopServiceRenderer
(implements net.sf.basedb.util.extensions.
Renderer
<A>)
net.sf.basedb.util.
StreamCacher
net.sf.basedb.util.extensions.debug.
StringConverter
net.sf.basedb.clients.web.formatter.
StringFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.util.
StringLengthComparator
(implements java.util.Comparator<T>)
net.sf.basedb.util.fuzzy.
StringMatcher
net.sf.basedb.util.fuzzy.
StringMatcher.FuzzyMatch
net.sf.basedb.core.
StringUtil
net.sf.basedb.core.query.
SubqueryExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.query.
SubtractExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.query.
SumExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.importer.spotdata.
SynchronizedSpotDataParser
(implements net.sf.basedb.util.bfs.
BfsParser
)
net.sf.basedb.util.importer.spotdata.
SynchronizedSpotDataParser.SynchronizedData
net.sf.basedb.core.
SystemItems
net.sf.basedb.util.encode.
TabCrLfEncoderDecoder
(implements net.sf.basedb.util.encode.
EncoderDecoder
)
net.sf.basedb.clients.web.taglib.table.
TableColumn
net.sf.basedb.core.hibernate.
TableExistsWork
(implements org.hibernate.jdbc.
ReturningWork
<T>)
net.sf.basedb.core.dbengine.
TableInfo
net.sf.basedb.core.dbengine.
TableInfo.ColumnInfo
(implements java.lang.Comparable<T>)
net.sf.basedb.core.dbengine.
TableInfo.ForeignKeyInfo
net.sf.basedb.core.dbengine.
TableInfo.IndexInfo
net.sf.basedb.core.dbengine.
TableInfo.PrimaryKeyInfo
net.sf.basedb.core.hibernate.
TableInfoWork
(implements org.hibernate.jdbc.
ReturningWork
<T>)
javax.servlet.jsp.tagext.
TagSupport
(implements javax.servlet.jsp.tagext.
IterationTag
, java.io.Serializable)
javax.servlet.jsp.tagext.
BodyTagSupport
(implements javax.servlet.jsp.tagext.
BodyTag
)
net.sf.basedb.clients.web.taglib.table.
Cell
(implements javax.servlet.jsp.tagext.
TryCatchFinally
)
net.sf.basedb.clients.web.taglib.
ExceptionCatcher
(implements javax.servlet.jsp.tagext.
TryCatchFinally
)
net.sf.basedb.clients.web.taglib.table.
ExtensionCells
net.sf.basedb.clients.web.taglib.tab.
Tab
(implements net.sf.basedb.clients.web.extensions.
DynamicActionAttributes
, javax.servlet.jsp.tagext.
DynamicAttributes
, net.sf.basedb.clients.web.extensions.tabcontrol.
TabAction
)
net.sf.basedb.clients.web.taglib.table.
CellValue
net.sf.basedb.clients.web.taglib.table.
ColumnHeaders
net.sf.basedb.clients.web.taglib.
Head
net.sf.basedb.clients.web.taglib.table.
Hidden
net.sf.basedb.clients.web.taglib.
Page
net.sf.basedb.clients.web.taglib.table.
PropertyFilter
net.sf.basedb.clients.web.taglib.
PropertyValue
net.sf.basedb.clients.web.taglib.extensions.
Render
net.sf.basedb.clients.web.taglib.extensions.
Scripts
net.sf.basedb.clients.web.taglib.
StylableTag
(implements net.sf.basedb.clients.web.extensions.
DynamicActionAttributes
, javax.servlet.jsp.tagext.
DynamicAttributes
)
net.sf.basedb.clients.web.taglib.
Body
net.sf.basedb.clients.web.taglib.
Button
net.sf.basedb.clients.web.taglib.
CalendarButton
net.sf.basedb.clients.web.taglib.table.
Button
net.sf.basedb.clients.web.taglib.
ButtonGroup
net.sf.basedb.clients.web.taglib.table.
ColumnDef
net.sf.basedb.clients.web.taglib.table.
Data
net.sf.basedb.clients.web.taglib.table.
Form
net.sf.basedb.clients.web.taglib.table.
Header
net.sf.basedb.clients.web.taglib.table.
HeaderRow
net.sf.basedb.clients.web.taglib.table.
Headers
net.sf.basedb.clients.web.taglib.
Help
net.sf.basedb.clients.web.taglib.
HideableSection
net.sf.basedb.clients.web.taglib.
Icon
net.sf.basedb.clients.web.taglib.table.
Label
net.sf.basedb.clients.web.taglib.menu.
Menu
net.sf.basedb.clients.web.taglib.menu.
Menuitem
net.sf.basedb.clients.web.taglib.menu.
Menuseparator
net.sf.basedb.clients.web.taglib.table.
Navigator
net.sf.basedb.clients.web.taglib.table.
Panel
net.sf.basedb.clients.web.taglib.path.
Path
net.sf.basedb.clients.web.taglib.path.
PathElement
net.sf.basedb.clients.web.taglib.table.
PresetSelector
net.sf.basedb.clients.web.taglib.table.
Row
net.sf.basedb.clients.web.taglib.table.
Rows
net.sf.basedb.clients.web.taglib.
Select
net.sf.basedb.clients.web.taglib.menu.
Submenu
net.sf.basedb.clients.web.taglib.tab.
TabControl
(implements net.sf.basedb.util.extensions.
Renderer
<A>)
net.sf.basedb.clients.web.taglib.table.
Table
net.sf.basedb.clients.web.taglib.table.
Toolbar
net.sf.basedb.clients.web.taglib.
Zoom
net.sf.basedb.clients.web.taglib.extensions.
Stylesheets
net.sf.basedb.util.zip.
TarFilePacker
(implements net.sf.basedb.util.zip.
FilePacker
)
net.sf.basedb.util.zip.
Bzip2FilePacker
net.sf.basedb.util.zip.
GzipFilePacker
net.sf.basedb.util.zip.
TarUtil
net.sf.basedb.clients.jobagent.executors.
ThreadJobExecutor
(implements net.sf.basedb.clients.jobagent.
JobExecutor
)
net.sf.basedb.clients.jobagent.executors.
ThreadJobExecutor.ShutdownHook
(implements java.lang.Runnable)
java.lang.Throwable (implements java.io.Serializable)
java.lang.Exception
java.io.IOException
net.sf.basedb.clients.web.fileupload.
UploadAbortedException
java.lang.RuntimeException
net.sf.basedb.core.authentication.
AuthenticationException
net.sf.basedb.core.authentication.
InvalidPasswordException
net.sf.basedb.core.authentication.
LoginException
net.sf.basedb.core.authentication.
UnknownLoginException
net.sf.basedb.core.
BaseException
net.sf.basedb.core.
ConfigurationException
net.sf.basedb.core.
ConnectionClosedException
net.sf.basedb.core.
DatabaseException
net.sf.basedb.core.
DetachedItemException
net.sf.basedb.core.
DeviceNotVerifiedException
net.sf.basedb.core.
InvalidDataException
net.sf.basedb.core.
DateFormatException
net.sf.basedb.core.
DisallowedValueException
net.sf.basedb.core.
InvalidAnnotationException
net.sf.basedb.core.
InvalidPathException
net.sf.basedb.core.
InvalidUseOfNullException
net.sf.basedb.core.
ItemAlreadyExistsException
net.sf.basedb.core.
ItemNotFoundException
net.sf.basedb.core.
NumberOutOfRangeException
net.sf.basedb.core.
ParameterException
net.sf.basedb.core.
QuotaException
net.sf.basedb.core.
StringTooLongException
net.sf.basedb.core.
UnsavedItemException
net.sf.basedb.core.
UnsupportedFileFormatException
net.sf.basedb.core.
InvalidPasswordException
net.sf.basedb.core.
InvalidRelationException
net.sf.basedb.core.
LoginException
net.sf.basedb.core.
PermissionDeniedException
net.sf.basedb.core.
AccountExpiredException
net.sf.basedb.core.
AlreadyLoggedInException
net.sf.basedb.core.
ItemInUseException
net.sf.basedb.core.
ItemModifiedException
net.sf.basedb.core.
NotLoggedInException
net.sf.basedb.core.signal.
SignalException
net.sf.basedb.core.signal.
SignalReceivedException
net.sf.basedb.core.signal.
UnsupportedSignalException
net.sf.basedb.clients.web.
DuplicateWizardException
net.sf.basedb.clients.web.
WebException
net.sf.basedb.util.error.
ThrowableUtil
java.util.TimerTask (implements java.lang.Runnable)
net.sf.basedb.core.
Application.DbCleaner
net.sf.basedb.core.
Application.SecondaryStorageControllerTask
net.sf.basedb.core.
Application.SessionControlCacheCleaner
net.sf.basedb.util.uri.http.
HttpConnectionManager.TimeoutTimer
net.sf.basedb.core.
InternalJobQueue
net.sf.basedb.clients.jobagent.
JobQueueChecker
net.sf.basedb.core.
Keyring.ReloadTask
net.sf.basedb.clients.jobagent.slotmanager.
MasterSlotManager.RemoteSlotTimeoutChecker
net.sf.basedb.clients.jobagent.slotmanager.
RemoteSlotManager.RemoteSlotPinger
net.sf.basedb.util.
StaticCache.CleanupTask
net.sf.basedb.util.timer.
ThreadTimerTask
net.sf.basedb.core.query.
ToDateExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.clients.web.extensions.toolbar.
ToolbarButtonRenderer
(implements net.sf.basedb.util.extensions.
Renderer
<A>)
net.sf.basedb.clients.web.extensions.toolbar.
ToolbarUtil
net.sf.basedb.util.encode.
ToSpaceEncoderDecoder
(implements net.sf.basedb.util.encode.
EncoderDecoder
)
net.sf.basedb.util.
ToStringComparator
<T> (implements java.util.Comparator<T>, java.io.Serializable)
net.sf.basedb.util.formatter.
ToStringFormatter
<T> (implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.core.log.
TransactionDetails
net.sf.basedb.util.
TransferRateProgressReporter
(implements net.sf.basedb.core.
AbsoluteProgressReporter
)
net.sf.basedb.util.listable.
TransformContext
net.sf.basedb.core.
Trashcan
net.sf.basedb.core.
Trashcan.CircularRefInfo
net.sf.basedb.util.
Tree
<E> (implements java.util.Collection<E>)
net.sf.basedb.util.
Tree.ElementIterator
(implements java.util.Iterator<E>)
net.sf.basedb.util.
Tree.Entry
<E>
net.sf.basedb.util.
Tree.EntryIterator
(implements java.util.Iterator<E>)
net.sf.basedb.core.hibernate.
TypeWrapper
<T>
net.sf.basedb.clients.web.extensions.
UninstalledFileProcessor
(implements net.sf.basedb.util.extensions.manager.
ExtensionsFileProcessor
)
net.sf.basedb.clients.web.extensions.
UninstallFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.units.
UnitCache
net.sf.basedb.util.units.
UnitCache.CacheKey
(implements java.lang.Comparable<T>)
net.sf.basedb.util.units.
UnitUtil
net.sf.basedb.util.extensions.manager.processor.
UnregisterExtensionsProcessor
(implements net.sf.basedb.util.extensions.manager.
ExtensionsFileProcessor
)
net.sf.basedb.core.
Update
net.sf.basedb.core.
Update.SchemaChange
net.sf.basedb.core.
Update.DropColumnChange
net.sf.basedb.clients.web.fileupload.
UploadedFile
net.sf.basedb.util.uri.
UriMetadata
net.sf.basedb.core.
User.QueryRuntimeFilterImpl
(implements net.sf.basedb.core.
QueryRuntimeFilter
)
net.sf.basedb.core.data.keyring.
UserGroups
(implements java.io.Serializable)
net.sf.basedb.core.
UserPermissions
net.sf.basedb.core.data.keyring.
UserRoles
(implements java.io.Serializable)
net.sf.basedb.util.extensions.manager.filter.
ValidAndNewOrModifiedFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.fileset.
ValidatingFileSetMember
net.sf.basedb.util.overview.
ValidationOptions
net.sf.basedb.util.fileset.
ValidationRenderer
(implements net.sf.basedb.util.extensions.
Renderer
<A>)
net.sf.basedb.util.overview.
Validator
(implements net.sf.basedb.util.overview.extensions.
ValidationRuleAction
)
net.sf.basedb.core.
Values
net.sf.basedb.util.
Values
net.sf.basedb.util.formatter.
ValueTypeFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.util.extensions.xml.
VariableConverter
(implements net.sf.basedb.util.extensions.xml.
ValueConverter
)
net.sf.basedb.core.
Version
net.sf.basedb.core.data.
VersionedParameter
(implements java.io.Serializable)
net.sf.basedb.core.
VirtualColumn
net.sf.basedb.core.query.
VirtualColumnExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.core.query.
VirtualColumnExpression.WrappedExpression
(implements net.sf.basedb.core.query.
Expression
)
net.sf.basedb.util.extensions.manager.filter.
WasProcessedFilter
(implements net.sf.basedb.util.filter.
Filter
<T>)
net.sf.basedb.util.formatter.
WellCoordinateFormatter
(implements net.sf.basedb.util.formatter.
Formatter
<T>)
net.sf.basedb.core.query.
WhenStatement
java.io.Writer (implements java.lang.Appendable, java.io.Closeable, java.io.Flushable)
java.io.PrintWriter
net.sf.basedb.util.bfs.
MetadataWriter
net.sf.basedb.util.export.
TableWriter
net.sf.basedb.util.bfs.
AnnotationWriter
net.sf.basedb.util.basefile.
BaseFileWriter
net.sf.basedb.util.bfs.
DataWriter
net.sf.basedb.util.extensions.xml.
XmlLoader
net.sf.basedb.clients.web.plugins.
XMLTemplate
(implements net.sf.basedb.clients.web.plugins.
ExportTemplate
)
net.sf.basedb.util.
XmlUtil2
net.sf.basedb.util.
XmlUtil2.Validator
(implements org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
net.sf.basedb.util.zip.
ZipFilePacker
(implements net.sf.basedb.util.zip.
FilePacker
)
net.sf.basedb.util.zip.
ZipUnpacker
Interface Hierarchy
net.sf.basedb.core.plugin.
About
net.sf.basedb.util.extensions.
ExtendedAbout
net.sf.basedb.core.
AccessControlled
net.sf.basedb.core.
Annotatable
net.sf.basedb.core.
AnnotatableProxy
net.sf.basedb.core.
AnnotatableProxy
net.sf.basedb.core.
DiskConsumable
(also extends net.sf.basedb.core.
Controlled
, net.sf.basedb.core.
Ownable
)
net.sf.basedb.core.
FileAttachable
net.sf.basedb.core.
FileStoreEnabled
net.sf.basedb.core.
Identifiable
net.sf.basedb.core.
Annotatable
net.sf.basedb.core.
AnnotatableProxy
net.sf.basedb.core.
AnnotatableProxy
net.sf.basedb.core.
DiskConsumable
(also extends net.sf.basedb.core.
Controlled
, net.sf.basedb.core.
Ownable
)
net.sf.basedb.core.
FileAttachable
net.sf.basedb.core.
FileStoreEnabled
net.sf.basedb.core.
Listable
(also extends net.sf.basedb.core.
Nameable
)
net.sf.basedb.core.
Nameable
net.sf.basedb.core.
Listable
(also extends net.sf.basedb.core.
Identifiable
)
net.sf.basedb.core.
Ownable
net.sf.basedb.core.
DiskConsumable
(also extends net.sf.basedb.core.
Controlled
)
net.sf.basedb.core.
Shareable
net.sf.basedb.core.
Registered
net.sf.basedb.core.
Removable
net.sf.basedb.core.
Shareable
net.sf.basedb.core.
Subtypable
net.sf.basedb.core.
SystemItem
net.sf.basedb.core.
Listable
(also extends net.sf.basedb.core.
Identifiable
, net.sf.basedb.core.
Nameable
)
net.sf.basedb.core.
Nameable
net.sf.basedb.core.
Listable
(also extends net.sf.basedb.core.
Identifiable
)
net.sf.basedb.core.
Ownable
net.sf.basedb.core.
DiskConsumable
(also extends net.sf.basedb.core.
Controlled
)
net.sf.basedb.core.
Shareable
net.sf.basedb.core.
Registered
net.sf.basedb.core.
Removable
net.sf.basedb.core.
Shareable
net.sf.basedb.core.
Subtypable
net.sf.basedb.core.
SystemItem
net.sf.basedb.util.extensions.
Action
net.sf.basedb.core.authentication.
AuthenticationManager
net.sf.basedb.clients.web.extensions.toolbar.
ButtonAction
net.sf.basedb.util.overview.extensions.
ChildNodeLoaderAction
net.sf.basedb.util.uri.
ConnectionManagerFactory
net.sf.basedb.clients.web.extensions.list.
ListColumnAction
<I,V>
net.sf.basedb.clients.web.extensions.login.
LoginFormAction
net.sf.basedb.core.log.
LogManagerFactory
net.sf.basedb.clients.web.extensions.menu.
MenuItemAction
net.sf.basedb.util.overview.extensions.
NodeValidatorAction
<I> (also extends net.sf.basedb.util.overview.validator.
NodeValidator
<I>)
net.sf.basedb.clients.web.extensions.edit.
OnSaveAction
net.sf.basedb.clients.web.extensions.plot.
OverviewPlotAction
net.sf.basedb.clients.web.extensions.section.
SectionAction
net.sf.basedb.clients.web.extensions.service.
ServiceControllerAction
net.sf.basedb.core.signal.
SignalHandler
net.sf.basedb.clients.web.extensions.skin.
SkinAction
net.sf.basedb.clients.web.extensions.startpage.
StartPageAction
net.sf.basedb.clients.web.extensions.tabcontrol.
TabAction
net.sf.basedb.util.fileset.
ValidationAction
net.sf.basedb.util.overview.extensions.
ValidationRuleAction
net.sf.basedb.util.extensions.
ActionFactory
<A>
net.sf.basedb.core.authentication.
Authenticator
net.sf.basedb.core.query.
AutoJoiner
<Q,E>
net.sf.basedb.util.basefile.
BaseFileSectionParser
net.sf.basedb.core.
Batcher
net.sf.basedb.util.bfs.
BfsParser
net.sf.basedb.core.
ClonableReporterQuery
net.sf.basedb.util.collections.
CollectionTransformer
<S,D>
net.sf.basedb.core.data.
ComponentData
net.sf.basedb.util.uri.
ConnectionManager
net.sf.basedb.util.uri.
ResumableConnectionManager
net.sf.basedb.core.
Controlled
net.sf.basedb.core.
DiskConsumable
(also extends net.sf.basedb.core.
Ownable
)
net.sf.basedb.core.
Transactional
net.sf.basedb.core.
Validatable
net.sf.basedb.clients.web.plugins.
DataLoader
<T>
net.sf.basedb.clients.web.plugins.
QueryWrapper
<T>
net.sf.basedb.util.bfs.
DataWriterFactory
<T>
net.sf.basedb.core.dbengine.
DbEngine
net.sf.basedb.clients.web.extensions.
DynamicActionAttributes
net.sf.basedb.util.
DynamicFilter
net.sf.basedb.util.encode.
EncoderDecoder
net.sf.basedb.core.log.
EntityLogger
net.sf.basedb.util.error.
ErrorHandler
net.sf.basedb.util.extensions.
ErrorHandler
<A>
net.sf.basedb.util.extensions.
ErrorHandlerFactory
<A>
net.sf.basedb.util.extensions.events.
EventFilter
net.sf.basedb.util.bfs.
EventHandler
java.util.EventListener
net.sf.basedb.util.extensions.events.
EventHandler
net.sf.basedb.util.export.spotdata.
ExportableField
net.sf.basedb.util.export.spotdata.
AssayField
net.sf.basedb.util.export.spotdata.
DynamicField
net.sf.basedb.util.export.spotdata.
ExportableFieldConverter
net.sf.basedb.clients.web.plugins.
ExportTemplate
net.sf.basedb.util.extensions.
Extension
<A>
net.sf.basedb.util.extensions.
ExtensionPoint
<A>
net.sf.basedb.util.extensions.manager.
ExtensionsFileProcessor
net.sf.basedb.util.extensions.
ExtensionsFilter
net.sf.basedb.util.bfs.
ExtraFileImporter
net.sf.basedb.util.bfs.
FilenameGenerator
<T>
net.sf.basedb.util.zip.
FilePacker
net.sf.basedb.util.importer.
FileWrapper
net.sf.basedb.util.filter.
Filter
<T>
net.sf.basedb.util.formatter.
Formatter
<T>
net.sf.basedb.core.data.
IdentifiableData
net.sf.basedb.core.data.
AnnotatableData
net.sf.basedb.core.data.
BatchableData
net.sf.basedb.core.data.
DiskConsumableData
net.sf.basedb.core.data.
ExtendableData
net.sf.basedb.core.data.
FileAttachableData
net.sf.basedb.core.data.
FileStoreEnabledData
net.sf.basedb.core.data.
NameableData
net.sf.basedb.core.data.
OwnableData
net.sf.basedb.core.data.
DiskConsumableData
net.sf.basedb.core.data.
ShareableData
net.sf.basedb.core.data.
RegisteredData
net.sf.basedb.core.data.
RemovableData
net.sf.basedb.core.data.
ShareableData
net.sf.basedb.core.data.
SystemData
net.sf.basedb.plugins.batchimport.
IdMethod
net.sf.basedb.util.bfs.
InputStreamLocator
net.sf.basedb.util.
IntensityCalculator
net.sf.basedb.core.signal.
InterruptHandler
java.lang.Iterable<T>
java.util.Collection<E>
java.util.List<E>
net.sf.basedb.core.query.
ResultList
<I> (also extends net.sf.basedb.core.query.
QueryResult
)
net.sf.basedb.core.query.
SqlResultList
<I>
java.util.Iterator<E>
net.sf.basedb.core.query.
ResultIterator
<I> (also extends net.sf.basedb.core.query.
QueryResult
)
net.sf.basedb.core.query.
SqlResultIterator
net.sf.basedb.util.jep.convert.
JepConversionFunction
<T>
net.sf.basedb.clients.jobagent.
JobExecutor
net.sf.basedb.util.json.
JsonConverter
<T>
net.sf.basedb.core.data.
LoggableData
net.sf.basedb.core.log.
LogManager
net.sf.basedb.util.parser.
Mapper
net.sf.basedb.core.
Metadata.PropertyPath
<C,V>
net.sf.basedb.util.overview.loader.
NodeLoader
<I>
net.sf.basedb.util.overview.loader.
NodeLoaderFactory
<L,K>
net.sf.basedb.util.overview.node.
NodeNameGenerator
<I>
net.sf.basedb.util.overview.validator.
NodeValidator
<I>
net.sf.basedb.util.overview.extensions.
NodeValidatorAction
<I> (also extends net.sf.basedb.util.extensions.
Action
)
net.sf.basedb.util.overview.validator.
NodeValidatorFactory
<L,K>
net.sf.basedb.core.plugin.
NonRestartable
net.sf.basedb.util.extensions.manager.
ObjectKey
<O>
net.sf.basedb.util.overview.
OverviewContext
net.sf.basedb.core.plugin.
ParameterValues
net.sf.basedb.clients.web.extensions.plot.
PlotGenerator
net.sf.basedb.core.plugin.
Plugin
net.sf.basedb.core.plugin.
AnalysisFilterPlugin
net.sf.basedb.core.plugin.
AnnotationSetterPlugin
net.sf.basedb.core.plugin.
AutoDetectingImporter
net.sf.basedb.util.parser.
ConfigureByExample
net.sf.basedb.util.zip.
FileUnpacker
net.sf.basedb.core.plugin.
ImmediateDownloadExporter
net.sf.basedb.core.plugin.
InteractivePlugin
net.sf.basedb.plugins.executor.
IOSupport
net.sf.basedb.plugins.executor.
IOSupport
net.sf.basedb.util.parser.
WrappedConfigureByExample
org.nfunk.jep.function.
PostfixMathCommandI
net.sf.basedb.util.jep.
JepFunction
net.sf.basedb.util.jep.
JepExpressionFunction
net.sf.basedb.util.jep.
JepRestrictionFunction
net.sf.basedb.core.
ProgressReporter
net.sf.basedb.core.
AbsoluteProgressReporter
net.sf.basedb.core.query.
Query
net.sf.basedb.core.query.
EntityQuery
net.sf.basedb.core.query.
HqlQuery
net.sf.basedb.core.query.
EntityQuery
net.sf.basedb.core.query.
SqlQuery
net.sf.basedb.core.query.
QueryElement
net.sf.basedb.core.query.
Expression
net.sf.basedb.core.query.
Join
net.sf.basedb.core.query.
Order
net.sf.basedb.core.query.
Restriction
net.sf.basedb.core.query.
Select
net.sf.basedb.core.
QueryExecutor.Cancelable
net.sf.basedb.core.query.
QueryResult
net.sf.basedb.core.query.
ResultIterator
<I> (also extends java.util.Iterator<E>)
net.sf.basedb.core.query.
SqlResultIterator
net.sf.basedb.core.query.
ResultList
<I> (also extends java.util.List<E>)
net.sf.basedb.core.query.
SqlResultList
<I>
net.sf.basedb.core.query.
SqlResultIterator
net.sf.basedb.core.query.
SqlResultList
<I>
net.sf.basedb.core.
QueryRuntimeFilter
net.sf.basedb.util.extensions.
Renderer
<A>
net.sf.basedb.util.extensions.
WrappingRenderer
<A>
net.sf.basedb.util.extensions.
RendererFactory
<A>
net.sf.basedb.core.plugin.
Request
net.sf.basedb.util.jobagent.
RequestHandler
net.sf.basedb.clients.jobagent.handlers.
CustomRequestHandler
net.sf.basedb.core.plugin.
Response
net.sf.basedb.core.migrate.
ResultWriter
net.sf.basedb.core.migrate.
ResultWriterFactory
net.sf.basedb.core.
SecondaryStorageController
net.sf.basedb.core.signal.
SignalReceiver
net.sf.basedb.core.signal.
SignalSender
net.sf.basedb.core.signal.
SignalTarget
net.sf.basedb.core.signal.
SignalTransporter
net.sf.basedb.clients.jobagent.slotmanager.
SlotManager
net.sf.basedb.util.listable.
SourceItemTransformer
net.sf.basedb.util.listable.
SourceItemTransformerFactory
net.sf.basedb.util.importer.spotdata.
SpotIntensityParser
net.sf.basedb.core.query.
SqlResult
net.sf.basedb.core.data.
SubtypableData
net.sf.basedb.core.
TransactionalAction
net.sf.basedb.util.transform.
Transformer
<T,F>
net.sf.basedb.util.units.
UnitConverter
net.sf.basedb.core.
UsableDataFileType
net.sf.basedb.util.extensions.xml.
ValueConverter
Annotation Type Hierarchy
net.sf.basedb.core.
SupportsPushAnnotations
(implements java.lang.annotation.Annotation)
net.sf.basedb.core.
SubtypableRelatedItems
(implements java.lang.annotation.Annotation)
net.sf.basedb.core.data.
PropertyPathProtected
(implements java.lang.annotation.Annotation)
net.sf.basedb.core.data.
NotLoggable
(implements java.lang.annotation.Annotation)
net.sf.basedb.util.extensions.xml.
VariableSetter
(implements java.lang.annotation.Annotation)
net.sf.basedb.util.extensions.xml.
PathSetter
(implements java.lang.annotation.Annotation)
net.sf.basedb.clients.web.extensions.
UnsafeScriptable
(implements java.lang.annotation.Annotation)
Enum Hierarchy
java.lang.Object
java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
net.sf.basedb.core.
VirtualTable
net.sf.basedb.core.
Type
net.sf.basedb.core.
Transactional.Action
net.sf.basedb.core.
SyncFilter.SourceItemTransform
net.sf.basedb.core.
ReporterCloneBatcher.CloneSource
net.sf.basedb.core.
Permission
net.sf.basedb.core.
Path.Type
net.sf.basedb.core.
Operator
net.sf.basedb.core.
Location
net.sf.basedb.core.
Job.Type
net.sf.basedb.core.
Job.Status
net.sf.basedb.core.
Job.ExecutionTime
net.sf.basedb.core.
ItemList.SynchronizeOption
net.sf.basedb.core.
ItemContext.SortDirection
net.sf.basedb.core.
Item
net.sf.basedb.core.
IntensityTransform
net.sf.basedb.core.
Include
net.sf.basedb.core.
Formula.AverageMethod
net.sf.basedb.core.
Formula.Type
net.sf.basedb.core.
Formula.Parser
net.sf.basedb.core.
File.Action
net.sf.basedb.core.
FeatureIdentificationMethod
net.sf.basedb.core.
ExtraValue.CoordinateType
net.sf.basedb.core.
BioWell.LockMode
net.sf.basedb.core.
BioMaterialEvent.Type
net.sf.basedb.core.
AnnotationBatcher.Change
net.sf.basedb.core.
Annotation.Source
net.sf.basedb.core.hibernate.
SchemaGenerator.Mode
net.sf.basedb.core.log.
ChangeType
net.sf.basedb.core.plugin.
Response.Status
net.sf.basedb.core.plugin.
Plugin.MainType
net.sf.basedb.core.plugin.
GuiContext.Type
net.sf.basedb.core.query.
QueryType
net.sf.basedb.core.query.
QuerySection
net.sf.basedb.core.query.
JoinType
net.sf.basedb.util.extensions.
LoggingErrorHandlerFactory.Level
net.sf.basedb.util.extensions.xml.
PathType
net.sf.basedb.util.fileset.
Accept
net.sf.basedb.util.formatter.
BooleanFormatter.Type
net.sf.basedb.util.overview.
Severity
net.sf.basedb.util.overview.
Node.Type
net.sf.basedb.util.overview.node.
ChildNodeDirection
net.sf.basedb.util.parser.
FlatFileParser.LineType
net.sf.basedb.util.plot.
HistogramPlot.YAggregate
net.sf.basedb.plugins.
PrintMapFlatFileImporter.Section
net.sf.basedb.plugins.
PrintMapFlatFileImporter.FormatType
net.sf.basedb.plugins.
Base1PluginExecuter.Base1JobParameterType
net.sf.basedb.clients.web.extensions.menu.
MenuItemAction.MenuType
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3.12.2: 2018-04-16
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