Package net.sf.basedb.util.overview.loader

Class ArraySlideLoader

java.lang.Object

net.sf.basedb.util.overview.loader.AbstractNodeLoader<I>

net.sf.basedb.util.overview.loader.BasicItemNodeLoader<ArraySlide>

net.sf.basedb.util.overview.loader.ArraySlideLoader

All Implemented Interfaces:

NodeLoader<ArraySlide>

public class ArraySlideLoader
extends BasicItemNodeLoader<ArraySlide>

Node loader implementation for array slides. The forward-loading direction goes from ArrayBatch:s -> ArraySlide:s -> PhysicalBioAssay:s. The reverse-loading direction is the opposite direction.

Version:

2.10

Author:

Nicklas

Last modified

$Date: 2011-06-08 15:00:33 +0200 (on, 08 jun 2011) $

Field Summary

Fields inherited from class net.sf.basedb.util.overview.loader.BasicItemNodeLoader

ALLOW_ROOT_NODE, allowAsRootNode, DENY_ROOT_NODE, factoryKey, nameGenerator

Constructor Summary

Constructors

Constructor	Description
ArraySlideLoader()

Method Summary

Modifier and Type	Method	Description
Node	createForwardNode(DbControl dc, OverviewContext context, Node batchNode)	Create forward-loading array slide nodes from a given array batch node.
Node	createReverseNode(DbControl dc, OverviewContext context, Node hybNode)	Create a reverse-loading array slide node from the hyrbidization node.
protected void	loadForwardChildNodes(DbControl dc, OverviewContext context, Node slideNode)	Loads the physical bioassay node that is related to the given array slide node.
protected void	loadPropertyChildNodes(DbControl dc, OverviewContext context, Node slideNode)	Loads property nodes of an array slide.
protected void	loadReverseChildNodes(DbControl dc, OverviewContext context, Node slideNode)	Loads the array batch node that is the parent of this array slide.

Methods inherited from class net.sf.basedb.util.overview.loader.BasicItemNodeLoader

createItemNode, createRootNode, getNodeFactory, getNodeFactory, getNodeLoader, getNodeLoaderFactory, getNodeNameGenerator, getNodeValidator, getNodeValidatorFactory, postValidateFolder

Methods inherited from class net.sf.basedb.util.overview.loader.AbstractNodeLoader

createPropertyNode, loadChildNodes, loadChildNodesOfFolderNode, loadChildNodesOfItemNode

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

ArraySlideLoader

public ArraySlideLoader()

Method Details

createForwardNode

public Node createForwardNode(DbControl dc,
 OverviewContext context,
 Node batchNode)

Create forward-loading array slide nodes from a given array batch node. The returned node is a folder-type node containing item nodes for each slide that has been created by the batch.

Specified by:

createForwardNode in interface NodeLoader<ArraySlide>

Overrides:

createForwardNode in class AbstractNodeLoader<ArraySlide>

Parameters:

dc - The DbControl to use for database access

context - The overview context

batchNode - The parent node

Returns:

The folder node for the slides

createReverseNode

public Node createReverseNode(DbControl dc,
 OverviewContext context,
 Node hybNode)

Create a reverse-loading array slide node from the hyrbidization node.

Specified by:

createReverseNode in interface NodeLoader<ArraySlide>

Overrides:

createReverseNode in class AbstractNodeLoader<ArraySlide>

Parameters:

dc - The DbControl to use for database access

context - The overview context

hybNode - The child node

Returns:

An array slide node, or null if the hybridization doesn't have a slide

loadPropertyChildNodes

protected void loadPropertyChildNodes(DbControl dc,
 OverviewContext context,
 Node slideNode)

Loads property nodes of an array slide.

• Annotations: AnnotationLoader.createPropertyNode(DbControl, OverviewContext, Node)

Overrides:

loadPropertyChildNodes in class AbstractNodeLoader<ArraySlide>

loadForwardChildNodes

protected void loadForwardChildNodes(DbControl dc,
 OverviewContext context,
 Node slideNode)

Loads the physical bioassay node that is related to the given array slide node.

Overrides:

loadForwardChildNodes in class AbstractNodeLoader<ArraySlide>

See Also:

• PhysicalBioAssayLoader.createForwardNode(DbControl, OverviewContext, Node)

loadReverseChildNodes

protected void loadReverseChildNodes(DbControl dc,
 OverviewContext context,
 Node slideNode)

Loads the array batch node that is the parent of this array slide.

Overrides:

loadReverseChildNodes in class AbstractNodeLoader<ArraySlide>

See Also:

• ArrayBatchLoader.createReverseNode(DbControl, OverviewContext, Node)