Package net.sf.basedb.core.data
Class TransformationData
java.lang.Object
net.sf.basedb.core.data.BasicData
net.sf.basedb.core.data.TransformationData
- All Implemented Interfaces:
IdentifiableData
,NameableData
,RemovableData
This class holds information about a transformation.
- Version:
- 2.0
- Author:
- Nicklas
- See Also:
- Last modified
- $Date: 2015-11-17 13:57:57 +0100 (ti, 17 nov 2015) $
- Hibernate: class
- table="`Transformations`" lazy="true"
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Field Summary
Modifier and TypeFieldDescriptionprivate String
private ExperimentData
private JobData
private String
private Set<BioAssaySetData>
private Set<RawBioAssayData>
private Integer
private BioAssaySetData
Fields inherited from interface net.sf.basedb.core.data.NameableData
MAX_DESCRIPTION_LENGTH, MAX_NAME_LENGTH
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Constructor Summary
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Method Summary
Modifier and TypeMethodDescriptionGet the description for the item.Get the experiment this bioassayset belongs to.getJob()
Get the job that was used to execute this transformationgetName()
Get the name of the item.(package private) Set<BioAssaySetData>
This is the inverse end.Get the source raw bioassays for the transformation.Get the ID of the user that removed this item.Get the source bioassayset for the transformation.void
setDescription
(String description) Set the description for the item.void
setExperiment
(ExperimentData experiment) void
void
Set the name of the item.(package private) void
setProducts
(Set<BioAssaySetData> products) (package private) void
setRawSources
(Set<RawBioAssayData> rawSources) void
setRemovedBy
(Integer removedBy) Set the ID of the user that removed this item or null to restore the item.void
setSource
(BioAssaySetData source) Methods inherited from class net.sf.basedb.core.data.BasicData
equals, getId, getVersion, hashCode, setId, setVersion, toString
Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait
Methods inherited from interface net.sf.basedb.core.data.IdentifiableData
getId, getVersion
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Field Details
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name
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description
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removedBy
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experiment
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source
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job
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rawSources
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products
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Constructor Details
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TransformationData
public TransformationData()
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Method Details
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getName
Description copied from interface:NameableData
Get the name of the item.- Specified by:
getName
in interfaceNameableData
- Returns:
- A
String
with the name of the item
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setName
Description copied from interface:NameableData
Set the name of the item. The name cannot be null and mustn't be longer than the value specified by theMAX_NAME_LENGTH
constant.- Specified by:
setName
in interfaceNameableData
- Parameters:
name
- The new name for the item
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getDescription
Description copied from interface:NameableData
Get the description for the item.- Specified by:
getDescription
in interfaceNameableData
- Returns:
- A
String
with a description of the item
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setDescription
Description copied from interface:NameableData
Set the description for the item. The description can be null but mustn't be longer than the value specified by theMAX_DESCRIPTION_LENGTH
constant.- Specified by:
setDescription
in interfaceNameableData
- Parameters:
description
- The new description for the item
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getRemovedBy
Description copied from interface:RemovableData
Get the ID of the user that removed this item.- Specified by:
getRemovedBy
in interfaceRemovableData
- Returns:
- The ID of a user or null if the item is not removed
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setRemovedBy
Description copied from interface:RemovableData
Set the ID of the user that removed this item or null to restore the item.- Specified by:
setRemovedBy
in interfaceRemovableData
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getExperiment
Get the experiment this bioassayset belongs to.- Hibernate: many-to-one
- column="`experiment_id`" not-null="true" outer-join="false" update="false"
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setExperiment
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getSource
Get the source bioassayset for the transformation. Null if this is a root transformation from raw bioassays.- Hibernate: many-to-one
- column="`bioassayset_id`" not-null="false" outer-join="false" update="false"
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setSource
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getJob
Get the job that was used to execute this transformation- Hibernate: many-to-one
- column="`job_id`" not-null="false" outer-join="false" update="false"
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setJob
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getRawSources
Get the source raw bioassays for the transformation.- Hibernate: set
- table="`TransformationRawBioAssays`" lazy="true"
- Hibernate: collection-key
- column="`transformation_id`"
- Hibernate: collection-many-to-many
- column="`rawbioassay_id`" class="net.sf.basedb.core.data.RawBioAssayData"
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setRawSources
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getProducts
Set<BioAssaySetData> getProducts()This is the inverse end.- See Also:
- Hibernate: set
- lazy="true" inverse="true" cascade="delete"
- Hibernate: collection-key
- column="`transformation_id`"
- Hibernate: collection-one-to-many
- class="net.sf.basedb.core.data.BioAssaySetData"
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setProducts
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