| 1 | <raw-data-type
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| 2 | id="illumina"
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| 3 | channels="1"
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| 4 | name="Illumina"
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| 5 | table="RawDataIllumina">
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| 6 | <property
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| 7 | name="MIN_Signal"
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| 8 | title="MIN_Signal"
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| 9 | description="Minimum intensity of the gene in the group."
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| 10 | column="minSignal"
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| 11 | type="float"
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| 12 | />
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| 13 | <property
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| 14 | name="AVG_Signal"
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| 15 | title="AVG_Signal"
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| 16 | description="Average intensity of the gene in the group."
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| 17 | column="avgSignal"
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| 18 | type="float"
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| 19 | />
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| 20 | <property
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| 21 | name="MAX_Signal"
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| 22 | title="MAX_Signal"
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| 23 | description="Maximum intensity of the gene in the group."
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| 24 | column="maxSignal"
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| 25 | type="float"
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| 26 | />
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| 27 | <property
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| 28 | name="NARRAYS"
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| 29 | title="NARRAYS"
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| 30 | description="Number of arrays in the group."
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| 31 | column="narrays"
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| 32 | type="int"
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| 33 | />
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| 34 | <property
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| 35 | name="ARRAY_STDEV"
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| 36 | title="ARRAY_STDEV"
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| 37 | description="Standard deviation associated with array-to-array variability within the group (undefined when the group contains a single array)."
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| 38 | column="arrayStdDev"
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| 39 | type="float"
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| 40 | />
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| 41 | <property
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| 42 | name="BEAD_STDEV"
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| 43 | title="BEAD_STDEV"
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| 44 | description="Average standard deviation associated with bead-to-bead variability for the arrays in the group."
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| 45 | column="beadStdDev"
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| 46 | type="float"
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| 47 | />
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| 48 | <property
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| 49 | name="Avg_NBEADS"
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| 50 | title="Avg_NBEADS"
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| 51 | description="Average number of beads per bead type representing probes for the gene."
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| 52 | column="avgNBeads"
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| 53 | type="int"
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| 54 | />
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| 55 | <property
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| 56 | name="Detection"
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| 57 | title="Detection"
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| 58 | description="p-value computed from the background model characterizing chance that the target sequence signal was distinguishable from the negative controls."
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| 59 | column="detection"
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| 60 | type="float"
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| 61 | />
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| 62 | <intensity-formula
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| 63 | name="avgSignal"
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| 64 | title="Average signal"
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| 65 | description="Average signal as determined by BeadStudio software."
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| 66 | >
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| 67 | <formula
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| 68 | channel="1"
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| 69 | expression="raw('AVG_Signal')"
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| 70 | />
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| 71 | </intensity-formula>
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| 72 | </raw-data-type>
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