| 1 | Tests was done on a dedicated performance test machine (grey). |
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| 2 | Results should not be compared to results made on other computers. |
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| 3 | |
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| 4 | The test was made on a fresh installation of BASE 2.11 on |
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| 5 | MySQL 5.0.51a which was initialised with 1000 raw data sets |
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| 6 | following the instructions in |
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| 7 | http://base.thep.lu.se/wiki/Specifications/Test_procedures/Performance |
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| 8 | |
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| 9 | The tests was made on a root bioassay set. |
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| 10 | |
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| 11 | # = Number of assays |
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| 12 | 1 = First run |
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| 13 | 2 = Second run |
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| 14 | S = Serial format |
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| 15 | M = Matrix format |
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| 16 | MeV = MeV format |
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| 17 | |
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| 18 | |
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| 19 | Export 1 |
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| 20 | ======== |
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| 21 | Format: Serial and Matrix |
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| 22 | Fields: ch1, ch2 |
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| 23 | |
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| 24 | Root bioassay set: |
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| 25 | # S1 S2 M1 M2 |
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| 26 | ------------------------------------ |
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| 27 | 10 0.12 0.12 0.03 0.02 |
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| 28 | 20 0.45 0.21 0.05 0.06 |
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| 29 | 40 1.02 0.58 0.10 0.14 |
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| 30 | 80 2.00 1.45 0.20 0.22 |
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| 31 | 160 1.09 1.51 1.57 0.43 |
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| 32 | 320 4.17 4.29 1.41 3.20 |
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| 33 | 640 11.59 8.52 5.05 5.45 |
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| 34 | |
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| 35 | Comment: As expected, not much difference from |
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| 36 | the reference times. |
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| 37 | |
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| 38 | |
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| 39 | Export 2 |
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| 40 | ======== |
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| 41 | Format: Serial and Matrix |
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| 42 | Fields: ch1, ch2 |
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| 43 | Reporter: External Id |
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| 44 | |
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| 45 | Root bioassay set: |
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| 46 | # S1 S2 M1 M2 |
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| 47 | ------------------------------------ |
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| 48 | 10 0.02 0.02 0.03 0.03 |
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| 49 | 20 0.05 0.05 0.06 0.16 |
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| 50 | 40 0.12 0.09 0.13 0.10 |
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| 51 | 80 0.18 0.19 0.27 0.21 |
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| 52 | 160 0.35 0.39 0.42 0.45 |
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| 53 | 320 1.09 1.12 1.53 1.40 |
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| 54 | 640 2.28 2.22 3.37 3.37 |
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| 55 | |
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| 56 | Comment: Serial export is about 3 times faster. |
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| 57 | Matrix export is about the same, except for 320 |
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| 58 | and 640 which has a small performance gain. |
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| 59 | |
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| 60 | |
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| 61 | Export 3 |
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| 62 | ======== |
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| 63 | Format: Serial, Matrix and MeV |
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| 64 | Fields: ch1, ch2 |
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| 65 | Reporter: all |
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| 66 | |
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| 67 | Root bioassay set: |
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| 68 | # S1 S2 M1 M2 MeV1 Mev2 |
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| 69 | ---------------------------------------------------- |
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| 70 | 10 0.48 0.06 0.14 0.05 0.20 0.06 |
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| 71 | 20 0.08 0.07 0.08 0.07 0.09 0.08 |
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| 72 | 40 0.20 0.12 0.19 0.11 0.23 0.11 |
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| 73 | 80 0.27 0.27 0.24 0.27 0.34 0.23 |
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| 74 | 160 0.43 1.11 0.43 0.43 2.11 0.39 |
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| 75 | 320 1.23 1.24 2.01 1.56 1.37 1.37 |
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| 76 | 640 2.54 2.55 4.27 3.44 3.37 3.43 |
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| 77 | |
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| 78 | Comment: All exports run about 5 times faster and up |
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| 79 | to 10-15 times faster as the number of bioassays |
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| 80 | are increased. |
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| 81 | |
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| 82 | |
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| 83 | Export 4 |
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| 84 | ======== |
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| 85 | Format: Serial and Matrix |
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| 86 | Fields: ch1, ch2, FG Mean (both channels) |
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| 87 | |
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| 88 | Root bioassay set: |
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| 89 | # S1 S2 M1 M2 |
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| 90 | ------------------------------------ |
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| 91 | 10 1.04 0.47 0.12 0.05 |
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| 92 | 20 1.36 1.48 0.11 0.11 |
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| 93 | 40 2.24 3.09 0.26 0.28 |
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| 94 | 80 7.55 6.54 1.40 3.50 |
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| 95 | 160 6.55 7.12 10.40 10.50 |
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| 96 | 320 14.26 11.53 36.36 36.25 |
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| 97 | 640 16.33 - 69.35 - |
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| 98 | |
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| 99 | Comment: As expected, not much difference from |
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| 100 | the reference times. |
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| 101 | |
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| 102 | |
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| 103 | Export 5 |
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| 104 | ======== |
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| 105 | Format: Serial and Matrix |
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| 106 | Fields: all |
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| 107 | |
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| 108 | Root bioassay set: |
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| 109 | # S1 S2 M1 M2 |
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| 110 | ------------------------------------ |
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| 111 | 10 0.28 0.30 0.15 0.15 |
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| 112 | 20 0.32 0.32 0.32 0.31 |
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| 113 | 40 1.03 1.02 2.16 1.18 |
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| 114 | 80 2.56 4.29 3.01 2.22 |
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| 115 | 160 12.26 15.36 14.16 13.37 |
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| 116 | 320 32.35 33.56 53.31 48.13 |
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| 117 | 640 62.29 - 123.16 - |
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| 118 | |
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| 119 | Comment: As expected, not much difference from |
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| 120 | the reference times. |
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| 121 | |
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| 122 | Export 6 |
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| 123 | ======== |
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| 124 | Format: Serial and Matrix |
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| 125 | Fields: all |
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| 126 | Reporter: all |
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| 127 | |
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| 128 | Root bioassay set: |
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| 129 | # S1 S2 M1 M2 |
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| 130 | ------------------------------------- |
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| 131 | 10 1.01 0.17 0.17 0.17 |
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| 132 | 20 0.35 0.34 0.34 0.33 |
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| 133 | 40 1.42 1.31 1.56 1.45 |
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| 134 | 80 2.25 2.08 2.17 2.14 |
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| 135 | 160 13.51 12.20 15.47 12.52 |
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| 136 | 320 35.56 31.07 50.04 52.34 |
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| 137 | 640 75.07 - 127.18 - |
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| 138 | |
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| 139 | Comment: Most exports run almost 2 times faster. |
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| 140 | |
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