Timeline



May 13, 2015:

11:36 AM Ticket #1941 (Store experimental factor values as part experiments) updated by Nicklas Nordborg
Summary changed
11:36 AM Ticket #1942 (Upgrade 3-rd party libraries) updated by Nicklas Nordborg
This should reference #1941 and not 1942!! (In [6908]) …
11:36 AM Changeset [6908] by Nicklas Nordborg
References #1942: Store experimental factor values as part experiments …
8:40 AM Ticket #1941 (Store experimental factor values as part experiments) updated by Nicklas Nordborg
Owner, Status changed
The current idea is to replace the Experiment<->Raw bioassay link …

May 12, 2015:

3:35 PM Ticket #1942 (Upgrade 3-rd party libraries) closed by Nicklas Nordborg
fixed: Closing this ticket for now.
2:31 PM Ticket #1942 (Upgrade 3-rd party libraries) updated by Nicklas Nordborg
(In [6907]) References #1942: Upgrade 3-rd party libraries Updated …
2:31 PM Changeset [6907] by Nicklas Nordborg
References #1942: Upgrade 3-rd party libraries Updated JavaSysMon to 0.3.5
2:00 PM Ticket #1942 (Upgrade 3-rd party libraries) updated by Nicklas Nordborg
(In [6906]) References #1942: Upgrade 3-rd party libraries Updated …
2:00 PM Changeset [6906] by Nicklas Nordborg
References #1942: Upgrade 3-rd party libraries Updated jBCrypt to 0.4.
1:51 PM Ticket #1942 (Upgrade 3-rd party libraries) updated by Nicklas Nordborg
(In [6905]) References #1942: Upgrade 3-rd party libraries Updated …
1:51 PM Changeset [6905] by Nicklas Nordborg
References #1942: Upgrade 3-rd party libraries Updated Apache Commons …
1:40 PM Ticket #1942 (Upgrade 3-rd party libraries) updated by Nicklas Nordborg
(In [6904]) References #1942: Upgrade 3-rd party libraries Updated …
1:40 PM Changeset [6904] by Nicklas Nordborg
References #1942: Upgrade 3-rd party libraries Updated Apache …
1:22 PM Ticket #1942 (Upgrade 3-rd party libraries) updated by Nicklas Nordborg
(In [6903]) References #1942: Upgrade 3-rd party libraries Updated …
1:22 PM Changeset [6903] by Nicklas Nordborg
References #1942: Upgrade 3-rd party libraries Updated JFreeChart to …
1:15 PM Ticket #1942 (Upgrade 3-rd party libraries) updated by Nicklas Nordborg
(In [6902]) References #1942: Upgrade 3-rd party libraries Updated …
1:15 PM Changeset [6902] by Nicklas Nordborg
References #1942: Upgrade 3-rd party libraries Updated PostgreSQL …
1:06 PM Ticket #1942 (Upgrade 3-rd party libraries) updated by Nicklas Nordborg
(In [6901]) References #1942: Upgrade 3-rd party libraries Updated …
1:06 PM Changeset [6901] by Nicklas Nordborg
References #1942: Upgrade 3-rd party libraries Updated MySQL …
12:49 PM Ticket #1942 (Upgrade 3-rd party libraries) updated by Nicklas Nordborg
(In [6900]) References #1942: Upgrade 3-rd party libraries Updated …
12:49 PM Changeset [6900] by Nicklas Nordborg
References #1942: Upgrade 3-rd party libraries Updated JDOM to 2.0.6
12:39 PM Ticket #1942 (Upgrade 3-rd party libraries) updated by Nicklas Nordborg
(In [6899]) References #1942: Upgrade 3-rd party libraries Updated …
12:39 PM Changeset [6899] by Nicklas Nordborg
References #1942: Upgrade 3-rd party libraries Updated Hibernate to 4.3.9.
11:28 AM Ticket #1940 (Fix javadoc warnings) closed by Nicklas Nordborg
fixed: The javadoc now builds without warnings or errors using …
11:27 AM Ticket #1940 (Fix javadoc warnings) updated by Nicklas Nordborg
(In [6898]) References #1940: Fix javadoc warnings Added …
11:27 AM Changeset [6898] by Nicklas Nordborg
References #1940: Fix javadoc warnings Added Xdoclint:syntax and …
9:25 AM Ticket #1940 (Fix javadoc warnings) updated by Nicklas Nordborg
(In [6897]) References #1940: Fix javadoc warnings Added …
9:25 AM Changeset [6897] by Nicklas Nordborg
References #1940: Fix javadoc warnings Added Xdoclint:reference and …
9:20 AM Ticket #1940 (Fix javadoc warnings) updated by Nicklas Nordborg
Xdoclint=missing gives up after finding 100 warnings in a handful of …
9:13 AM Ticket #1939 (Fix javac compiler warnings) closed by Nicklas Nordborg
fixed
9:13 AM Ticket #1928 (Switch to Tomcat 8) closed by Nicklas Nordborg
fixed: I have been running Tomcat 8 for a while now and haven't noticed any …
9:12 AM Ticket #1926 (Switch to Java 8) closed by Nicklas Nordborg
fixed

May 5, 2015:

4:29 PM WikiStart edited by Jari Häkkinen
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8:02 AM Changeset [6896] by Nicklas Nordborg
Merge patch release BASE 3.5.2 to the trunk.
7:57 AM Milestone BASE 3.5.2 completed
Bug fixes for 3.5.1 Revision Log: log:branches/3.5-stable@6889:6894
7:57 AM WikiStart edited by Nicklas Nordborg
Released BASE 3.5.2 (diff)
7:56 AM DownloadPage edited by Nicklas Nordborg
Released BASE 3.5.2 (diff)
7:54 AM Changeset [6895] by Nicklas Nordborg
Changes for future release 3.5.3
7:49 AM Changeset [6894] by Nicklas Nordborg
Tagging BASE 3.5.2
7:49 AM Changeset [6893] by Nicklas Nordborg
Preparing to release BASE 3.5.2
7:48 AM Ticket #1946 (NullPointerException in item list view) closed by Nicklas Nordborg
fixed: (In [6892]) Fixes #1946: NullPointerException in item list view
7:48 AM Changeset [6892] by Nicklas Nordborg
Fixes #1946: NullPointerException in item list view

May 4, 2015:

11:41 AM Ticket #1946 (NullPointerException in item list view) created by Nicklas Nordborg
This seems to happen for all item lists that use synchronization …

Apr 29, 2015:

9:48 AM Changeset [6891] by Nicklas Nordborg
Merge patch release 3.5.1 to the trunk.
9:39 AM Milestone BASE 3.5.1 completed
Bug fixes for 3.5 Revision Log: log:branches/3.5-stable@6878:6889
9:39 AM WikiStart edited by Nicklas Nordborg
Released BASE 3.5.1 (diff)
9:38 AM DownloadPage edited by Nicklas Nordborg
Released BASE 3.5.1 (diff)
9:35 AM Changeset [6890] by Nicklas Nordborg
Changes for future release BASE 3.5.2
9:31 AM Changeset [6889] by Nicklas Nordborg
Tagging BASE 3.5.1
9:23 AM Changeset [6888] by Nicklas Nordborg
Preparing to release BASE 3.5.1

Apr 28, 2015:

3:20 PM Ticket #1945 (It's not possible to create an item and add it to an item list in the ...) closed by Nicklas Nordborg
fixed
3:11 PM Ticket #1943 (Pagination problems when sorting on non-unique column) closed by Nicklas Nordborg
fixed: (In [6887]) Fixes #1943: Pagination problems when sorting on …
3:11 PM Changeset [6887] by Nicklas Nordborg
Fixes #1943: Pagination problems when sorting on non-unique column …
2:02 PM Ticket #1944 (Spelling mistake in documentation) closed by Nicklas Nordborg
fixed: (In [6886]) Fixes #1944: Spelling mistake in documentation
2:02 PM Changeset [6886] by Nicklas Nordborg
Fixes #1944: Spelling mistake in documentation
2:01 PM Ticket #1945 (It's not possible to create an item and add it to an item list in the ...) updated by Nicklas Nordborg
(In [6885]) References #1945: It's not possible to create an item and …
2:01 PM Changeset [6885] by Nicklas Nordborg
References #1945: It's not possible to create an item and add it to an …
1:15 PM Ticket #1945 (It's not possible to create an item and add it to an item list in the ...) updated by Nicklas Nordborg
(In [6884]) References #1945: It's not possible to create an item and …
1:15 PM Changeset [6884] by Nicklas Nordborg
References #1945: It's not possible to create an item and add it to an …
9:10 AM Ticket #1945 (It's not possible to create an item and add it to an item list in the ...) updated by Nicklas Nordborg
(In [6883]) References #1945: It's not possible to create an item and …
9:10 AM Changeset [6883] by Nicklas Nordborg
References #1945: It's not possible to create an item and add it to an …

Apr 27, 2015:

2:56 PM Ticket #1945 (It's not possible to create an item and add it to an item list in the ...) updated by Nicklas Nordborg
(In [6882]) References #1945: It's not possible to create an item and …
2:56 PM Changeset [6882] by Nicklas Nordborg
References #1945: It's not possible to create an item and add it to an …
2:05 PM Ticket #1945 (It's not possible to create an item and add it to an item list in the ...) created by Nicklas Nordborg
This is not possible to reproduce in the web gui, but requires a …

Apr 23, 2015:

8:37 AM Ticket #1944 (Spelling mistake in documentation) created by Nicklas Nordborg
In the upgrade instructions at …

Apr 21, 2015:

2:35 PM Ticket #1943 (Pagination problems when sorting on non-unique column) created by Nicklas Nordborg
So far, this has been observed on PostgreSQL only... It was …
9:59 AM Ticket #1940 (Fix javadoc warnings) updated by Nicklas Nordborg
(In [6881]) References #1940: Fix javadoc warnings Enabled …
9:59 AM Changeset [6881] by Nicklas Nordborg
References #1940: Fix javadoc warnings Enabled …
9:58 AM Ticket #1940 (Fix javadoc warnings) updated by Nicklas Nordborg
Owner, Status changed
8:32 AM Milestone BASE 3.5 completed
8:31 AM DeveloperInformation edited by Nicklas Nordborg
Remove links to 3.5-beta documentation (diff)
8:26 AM Changeset [6880] by Nicklas Nordborg
Merge pre-3.5 changes to the trunk.
8:17 AM WikiStart edited by Nicklas Nordborg
Released BASE 3.5 (diff)
8:16 AM DownloadPage edited by Nicklas Nordborg
Released BASE 3.5 (diff)
8:10 AM Changeset [6879] by Nicklas Nordborg
Changes for future release BASE 3.5.1
8:04 AM Changeset [6878] by Nicklas Nordborg
Tagging BASE 3.5
8:03 AM Changeset [6877] by Nicklas Nordborg
Preparing to release BASE 3.5
8:02 AM Ticket #1325 (Lists of items (similar funcion as biomaterial lists)) updated by Nicklas Nordborg
(In [6876]) References #1325. Fixed compiler warning.
8:02 AM Changeset [6876] by Nicklas Nordborg
References #1325. Fixed compiler warning.

Apr 20, 2015:

11:08 AM Ticket #1939 (Fix javac compiler warnings) updated by Nicklas Nordborg
(In [6875]) References #1939: Fix javac compiler warnings Fixes …
11:08 AM Changeset [6875] by Nicklas Nordborg
References #1939: Fix javac compiler warnings Fixes warnings after …

Apr 17, 2015:

2:02 PM Ticket #1939 (Fix javac compiler warnings) updated by Nicklas Nordborg
(In [6874]) References #1939: Fix javac compiler warnings Get rid of …
2:02 PM Changeset [6874] by Nicklas Nordborg
References #1939: Fix javac compiler warnings Get rid of generic …

Apr 16, 2015:

2:42 PM Ticket #1939 (Fix javac compiler warnings) updated by Nicklas Nordborg
[6871] should fix warnings after setting -Xlint:dep-ann. Except for …
2:39 PM Ticket #1939 (Fix javac compiler warnings) updated by Nicklas Nordborg
(In [6873]) References #1939: Fix javac compiler warnings Fixes …
2:39 PM Changeset [6873] by Nicklas Nordborg
References #1939: Fix javac compiler warnings Fixes warnings after …
2:07 PM Ticket #1939 (Fix javac compiler warnings) updated by Nicklas Nordborg
(In [6872]) References #1939: Fix javac compiler warnings Fixes …
2:07 PM Changeset [6872] by Nicklas Nordborg
References #1939: Fix javac compiler warnings Fixes warnings after …
1:53 PM Ticket #1325 (Lists of items (similar funcion as biomaterial lists)) updated by Nicklas Nordborg
(In [6871]) References #1325: Lists of items Adding @Deprecated …
1:53 PM Changeset [6871] by Nicklas Nordborg
References #1325: Lists of items Adding @Deprecated annotation to …
1:47 PM Ticket #1939 (Fix javac compiler warnings) updated by Nicklas Nordborg
(In [6870]) References #1939: Fix javac compiler warnings Fixes …
1:47 PM Changeset [6870] by Nicklas Nordborg
References #1939: Fix javac compiler warnings Fixes warnings after …
1:46 PM Ticket #1939 (Fix javac compiler warnings) updated by Nicklas Nordborg
Owner, Status changed
10:59 AM Ticket #1939 (Fix javac compiler warnings) updated by Nicklas Nordborg
(In [6869]) References #1939: Fix javac compiler warnings Remove …
10:59 AM Changeset [6869] by Nicklas Nordborg
References #1939: Fix javac compiler warnings Remove reference to …
10:44 AM Ticket #1928 (Switch to Tomcat 8) updated by Nicklas Nordborg
Status, Owner changed
10:44 AM Ticket #1926 (Switch to Java 8) updated by Nicklas Nordborg
Owner, Status changed
10:43 AM Ticket #1942 (Upgrade 3-rd party libraries) updated by Nicklas Nordborg
Component changed
9:46 AM Ticket #1942 (Upgrade 3-rd party libraries) created by Nicklas Nordborg
It's time for this again. Last time was #1809.
9:42 AM Ticket #1941 (Store experimental factor values as part experiments) created by Nicklas Nordborg
The current implementation of experimental factor values rely on …
9:21 AM Changeset [6868] by Nicklas Nordborg
Remove reference to ${info.build}. Should have been removed as part of …
9:18 AM Ticket #1940 (Fix javadoc warnings) created by Nicklas Nordborg
The javadoc tool in Java 8 generate a lot of warnings and error …
9:14 AM Ticket #1939 (Fix javac compiler warnings) created by Nicklas Nordborg
We are currently compiling all code with -Xlint:unchecked which …

Apr 15, 2015:

2:21 PM Ticket #1926 (Switch to Java 8) updated by Nicklas Nordborg
(In [6867]) References #1926: Switch to Java 8 Fixing javadoc …
2:21 PM Changeset [6867] by Nicklas Nordborg
References #1926: Switch to Java 8 Fixing javadoc stylesheet so that …
2:03 PM Ticket #1926 (Switch to Java 8) updated by Nicklas Nordborg
(In [6866]) References #1926: Switch to Java 8 Turning off the new …
2:03 PM Changeset [6866] by Nicklas Nordborg
References #1926: Switch to Java 8 Turning off the new javadoc …
1:40 PM Tickets #1926,​1928 batch updated by Nicklas Nordborg
(In [6865]) References #1926 and #1928. Updated javadoc links.
1:40 PM Changeset [6865] by Nicklas Nordborg
References #1926 and #1928. Updated javadoc links.
1:35 PM Ticket #1928 (Switch to Tomcat 8) updated by Nicklas Nordborg
(In [6864]) References #1928: Switch to Tomcat 8 Update some JAR …
1:35 PM Changeset [6864] by Nicklas Nordborg
References #1928: Switch to Tomcat 8 Update some JAR files with new …
1:13 PM Ticket #1928 (Switch to Tomcat 8) updated by Nicklas Nordborg
(In [6863]) References #1928: Switch to Tomcat 8 Updated installation …
1:13 PM Changeset [6863] by Nicklas Nordborg
References #1928: Switch to Tomcat 8 Updated installation documentation.
1:01 PM Ticket #1926 (Switch to Java 8) updated by Nicklas Nordborg
(In [6862]) References #1926: Switch to Java 8 Updated installation …
1:01 PM Changeset [6862] by Nicklas Nordborg
References #1926: Switch to Java 8 Updated installation documentation.
12:51 PM Ticket #1926 (Switch to Java 8) updated by Nicklas Nordborg
(In [6861]) References #1926: Switch to Java 8 Update build process …
12:51 PM Changeset [6861] by Nicklas Nordborg
References #1926: Switch to Java 8 Update build process to use Java 8.
9:15 AM Changeset [6860] by Nicklas Nordborg
Fixes warnings about not closing resources (eg. files/streams) in all …
7:58 AM Changeset [6859] by Nicklas Nordborg
Remove debug output.
7:57 AM Changeset [6858] by Nicklas Nordborg
Fix some more javadoc warnings.
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