Timeline



Nov 29, 2013:

1:21 PM Ticket #1729 (Move in-page <script> elements to external *.js files) updated by Nicklas Nordborg
(In [6363]) References #1729: Move in-page <script> elements to …
1:21 PM Changeset [6363] by Nicklas Nordborg
References #1729: Move in-page <script> elements to external *.js …

Nov 28, 2013:

3:45 PM Ticket #1773 (Tag items should be annotatable) updated by olle
(In [6362]) Refs #1773. Page for inspecting a Tag item updated by …
3:45 PM Changeset [6362] by olle
Refs #1773. Page for inspecting a Tag item updated by adding a "Change …
3:36 PM Ticket #1772 (Software items should be annotatable) updated by olle
(In [6361]) Refs #1772. Page for inspecting a Software item updated by …
3:36 PM Changeset [6361] by olle
Refs #1772. Page for inspecting a Software item updated by adding a …
1:20 PM Ticket #1771 (Hardware items should be annotatable) updated by olle
(In [6360]) Refs #1771. Page for inspecting a Hardware item updated by …
1:20 PM Changeset [6360] by olle
Refs #1771. Page for inspecting s Hardware item updated by adding a …

Nov 27, 2013:

2:28 PM Ticket #1784 (Add support for logging old values) closed by Nicklas Nordborg
fixed
2:26 PM Ticket #1785 (Implement support for ignoring changes to some properties when logging) closed by Nicklas Nordborg
fixed
2:05 PM Ticket #1790 (Include changes to AnyToAny items in the change log) closed by Nicklas Nordborg
fixed: (In [6359]) Fixes #1790: Include changes to AnyToAny items in the …
2:05 PM Changeset [6359] by Nicklas Nordborg
Fixes #1790: Include changes to AnyToAny items in the change log …
9:15 AM Ticket #1790 (Include changes to AnyToAny items in the change log) updated by Nicklas Nordborg
Owner, Status changed
9:15 AM Ticket #1790 (Include changes to AnyToAny items in the change log) created by Nicklas Nordborg
The changes should be logged as part of the 'from' item.
9:12 AM Ticket #1789 (Add flag to annotation types that disable logging of values) closed by Nicklas Nordborg
fixed: (In [6358]) Fixes #1789: Add flag to annotation types that disable …
9:12 AM Changeset [6358] by Nicklas Nordborg
Fixes #1789: Add flag to annotation types that disable logging of values

Nov 26, 2013:

2:21 PM Ticket #1789 (Add flag to annotation types that disable logging of values) created by Nicklas Nordborg
This was first mentioned in #1784 as a possible information leak to …
2:18 PM Ticket #1788 (Inject non-Hibernate changes to the change log) closed by Nicklas Nordborg
fixed: (In [6357]) Fixes #1788: Inject non-Hibernate changes to the change …
2:18 PM Changeset [6357] by Nicklas Nordborg
Fixes #1788: Inject non-Hibernate changes to the change log The core …
1:06 PM Ticket #1788 (Inject non-Hibernate changes to the change log) created by Nicklas Nordborg
The change history logging currently build entirely on callbacks from …
12:53 PM Ticket #1787 (Protect sensitive data from being loaded by the Metadata class) closed by Nicklas Nordborg
fixed: (In [6356]) Fixes #1787: Protect sensitive data from being loaded by …
12:53 PM Changeset [6356] by Nicklas Nordborg
Fixes #1787: Protect sensitive data from being loaded by the Metadata class
12:50 PM Ticket #1787 (Protect sensitive data from being loaded by the Metadata class) created by Nicklas Nordborg
The Metadata class can be used to load data from the database using …
12:46 PM Ticket #1784 (Add support for logging old values) updated by Nicklas Nordborg
(In [6355]) References #1784: Add support for logging old values …
12:46 PM Changeset [6355] by Nicklas Nordborg
References #1784: Add support for logging old values Added permission …

Nov 25, 2013:

2:38 PM Ticket #1784 (Add support for logging old values) updated by Nicklas Nordborg
(In [6354]) References #1784: Add support for logging old values The …
2:38 PM Changeset [6354] by Nicklas Nordborg
References #1784: Add support for logging old values The annotation …
12:58 PM Ticket #1784 (Add support for logging old values) updated by Nicklas Nordborg
(In [6353]) References #1784: Add support for logging old values …
12:58 PM Changeset [6353] by Nicklas Nordborg
References #1784: Add support for logging old values Formatting of …
11:50 AM Ticket #1729 (Move in-page <script> elements to external *.js files) updated by Nicklas Nordborg
(In [6352]) References #1729: Move in-page <script> elements to …
11:50 AM Changeset [6352] by Nicklas Nordborg
References #1729: Move in-page <script> elements to external *.js …
9:20 AM Ticket #1784 (Add support for logging old values) updated by Nicklas Nordborg
(In [6351]) References #1784: Add support for logging old values The …
9:20 AM Changeset [6351] by Nicklas Nordborg
References #1784: Add support for logging old values The core …

Nov 22, 2013:

12:59 PM Ticket #1784 (Add support for logging old values) updated by Nicklas Nordborg
After a short meeting it was decided that 1 and 2 (not 2b) should be …
10:41 AM Ticket #1785 (Implement support for ignoring changes to some properties when logging) updated by Nicklas Nordborg
(In [6350]) References #1785: Implement support for ignoring changes …
10:41 AM Changeset [6350] by Nicklas Nordborg
References #1785: Implement support for ignoring changes to some …
10:36 AM Ticket #1786 (Create one log entry for every changed property instead of building a ...) closed by Nicklas Nordborg
fixed: (In [6349]) Fixes #1786: Create one log entry for every changed …
10:36 AM Changeset [6349] by Nicklas Nordborg
Fixes #1786: Create one log entry for every changed property instead …

Nov 21, 2013:

2:31 PM Ticket #1786 (Create one log entry for every changed property instead of building a ...) updated by Nicklas Nordborg
Owner, Status changed
2:21 PM Ticket #1786 (Create one log entry for every changed property instead of building a ...) created by Nicklas Nordborg
This is related to #1784 and is a first step for making it possible to …
2:17 PM Ticket #1785 (Implement support for ignoring changes to some properties when logging) updated by Nicklas Nordborg
(In [6348]) References #1785: Implement support for ignoring changes …
2:17 PM Changeset [6348] by Nicklas Nordborg
References #1785: Implement support for ignoring changes to some …
8:56 AM Ticket #1785 (Implement support for ignoring changes to some properties when logging) updated by Nicklas Nordborg
Owner, Status changed
8:56 AM Ticket #1785 (Implement support for ignoring changes to some properties when logging) created by Nicklas Nordborg
This is somewhat related to #1754 which caused all numeric fields to …

Nov 20, 2013:

1:57 PM Ticket #1784 (Add support for logging old values) updated by Nicklas Nordborg
Here are a few ideas that can be implemented independently of each …
10:25 AM Ticket #1784 (Add support for logging old values) updated by Nicklas Nordborg
There is at least one security-related issue that must be considered …

Nov 19, 2013:

3:52 PM Ticket #1784 (Add support for logging old values) updated by Nicklas Nordborg
Status, Owner changed
1:46 PM Ticket #1784 (Add support for logging old values) created by Nicklas Nordborg
The current logging implementation has support for detecting changes …
11:36 AM Ticket #1783 (Empty help for plug-in parameters) closed by Nicklas Nordborg
fixed: (In [6347]) Fixes #1783: Empty help for plug-in parameters
11:36 AM Changeset [6347] by Nicklas Nordborg
Fixes #1783: Empty help for plug-in parameters
11:35 AM no-help.png attached to Ticket #1783 by Nicklas Nordborg
Example of an empty help note
11:35 AM Ticket #1783 (Empty help for plug-in parameters) updated by Nicklas Nordborg
Owner, Status, Summary changed
11:35 AM Ticket #1783 (Empty help for plug-in parameters) created by Nicklas Nordborg
Some plug-ins parameters doesn't offer any description which results …
11:28 AM Ticket #1781 (Can't copy transformation for BASE 1 plug-in with enum parameters) closed by Nicklas Nordborg
fixed: (In [6346]) Fixes #1781: Can't copy transformation for BASE 1 plug-in …
11:28 AM Changeset [6346] by Nicklas Nordborg
Fixes #1781: Can't copy transformation for BASE 1 plug-in with enum …
9:52 AM Ticket #1781 (Can't copy transformation for BASE 1 plug-in with enum parameters) updated by Nicklas Nordborg
Owner, Status changed

Nov 15, 2013:

7:54 AM Ticket #1342 (Fix message sending in InternalStorageController) updated by Nicklas Nordborg
Milestone changed
7:54 AM Ticket #1059 (JasperException: Unable to find setter method for attribute: direction ...) updated by Nicklas Nordborg
Milestone changed
7:54 AM Ticket #1339 (Implement the net.sf.basedb.util.Tree.equals() method) updated by Nicklas Nordborg
Milestone changed
7:54 AM Ticket #683 (Holding down SHIFT, CTRL or ALT when creating a new item should ...) updated by Nicklas Nordborg
Milestone changed
7:53 AM Ticket #775 (Refresh redirects) updated by Nicklas Nordborg
Milestone changed
7:53 AM Ticket #653 (Implement DbControl.flush() method) updated by Nicklas Nordborg
Milestone changed
7:53 AM Ticket #571 (Allow spot image generator to use any layer in multi-image TIFF file) updated by Nicklas Nordborg
Milestone changed
7:53 AM Ticket #450 (Plugin for importing Imagene raw data) updated by Nicklas Nordborg
Milestone changed
7:53 AM Ticket #1438 (Installation wizard) updated by Nicklas Nordborg
Milestone changed
7:52 AM Ticket #1258 (New export format for bioassay set spot data) updated by Nicklas Nordborg
Milestone changed
7:52 AM Ticket #1135 (Create plug-in for importing raw data to multiple raw bioassays in one go) updated by Nicklas Nordborg
Milestone changed
7:52 AM Ticket #764 (Selecting Bioassays in the plot tool.) updated by Nicklas Nordborg
Milestone changed
7:52 AM Ticket #185 (Refactor the Item class and DbControl and more...) updated by Nicklas Nordborg
Milestone changed
7:52 AM Ticket #1205 (Serious problem filtering on annotations where one whishes to exlude a ...) updated by Nicklas Nordborg
Milestone changed

Nov 14, 2013:

8:49 AM Ticket #1782 (Select date dialog doesn't display correctly in IE10) closed by Nicklas Nordborg
fixed: (In [6345]) Fixes #1782: Select date dialog doesn't display correctly …
8:49 AM Changeset [6345] by Nicklas Nordborg
Fixes #1782: Select date dialog doesn't display correctly in IE10 …

Nov 13, 2013:

8:23 PM Ticket #1782 (Select date dialog doesn't display correctly in IE10) updated by Nicklas Nordborg
Version changed
Checked a few more combinations that display the dialog correctly: * …
12:16 PM Ticket #1780 (Copy-transformation icon should be disabled if logged in user doesn't ...) closed by olle
fixed: Ticket closed as the requested functionality has been added.
12:15 PM Ticket #1779 (Do not show plug-in configurations if the logged in user lacks USE ...) closed by olle
fixed: Ticket closed as the requested functionality has been added.
11:55 AM Tickets #1779,​1780 batch updated by olle
(In [6344]) Refs #1780. Refs #1779. The option to copy a …
11:55 AM Changeset [6344] by olle
Refs #1780. Refs #1779. The option to copy a transformation is now …
11:23 AM Ticket #1780 (Copy-transformation icon should be disabled if logged in user doesn't ...) updated by olle
Problem discussion: * The 'copy' icon for a transformation is placed …

Nov 12, 2013:

3:44 PM Ticket #1780 (Copy-transformation icon should be disabled if logged in user doesn't ...) updated by olle
Example of use case: * The copy icon …
3:44 PM Ticket #1780 (Copy-transformation icon should be disabled if logged in user doesn't ...) updated by olle
Status changed
Ticket accepted.
3:44 PM Ticket #1780 (Copy-transformation icon should be disabled if logged in user doesn't ...) updated by olle
Owner changed
12:47 PM Ticket #1779 (Do not show plug-in configurations if the logged in user lacks USE ...) updated by olle
(In [6343]) Refs #1779. Plug-in configurations are now not shown if …
12:47 PM Changeset [6343] by olle
Refs #1779. Plug-in configurations are now not shown if the logged-in …
12:44 PM Ticket #1779 (Do not show plug-in configurations if the logged in user lacks USE ...) updated by olle
Problem discussion: * JSP script index.jsp in www/common/plugin/
12:35 PM Ticket #1779 (Do not show plug-in configurations if the logged in user lacks USE ...) updated by olle
Traceability note: * A unified installation procedure for plug-ins …
12:34 PM Ticket #1779 (Do not show plug-in configurations if the logged in user lacks USE ...) updated by olle
Status changed
Ticket accepted.
12:33 PM Ticket #1779 (Do not show plug-in configurations if the logged in user lacks USE ...) updated by olle
Owner changed
8:52 AM select-date-ie10.png attached to Ticket #1782 by Nicklas Nordborg
8:52 AM Ticket #1782 (Select date dialog doesn't display correctly in IE10) created by Nicklas Nordborg
See attached image. The dialog is still functional.

Nov 7, 2013:

12:19 PM Ticket #764 (Selecting Bioassays in the plot tool.) closed by Jari Häkkinen
wontfix: We need more flexible plot functionality. For that we need discussions …
10:56 AM Ticket #1781 (Can't copy transformation for BASE 1 plug-in with enum parameters) updated by Nicklas Nordborg
This issue is caused by the fix for #1437 which changed how enum …
10:47 AM Ticket #1781 (Can't copy transformation for BASE 1 plug-in with enum parameters) created by Nicklas Nordborg
At first, it seems to work, and the job configuration dialog is filled …
10:42 AM Ticket #1780 (Copy-transformation icon should be disabled if logged in user doesn't ...) created by Nicklas Nordborg
Related to #1779, but since no selection of plug-ins is taking place …
10:41 AM Ticket #1779 (Do not show plug-in configurations if the logged in user lacks USE ...) created by Nicklas Nordborg
The current "Run plugin" dialog include plug-ins and configurations …

Nov 6, 2013:

3:25 PM Ticket #1205 (Serious problem filtering on annotations where one whishes to exlude a ...) closed by Jari Häkkinen
invalid
3:19 PM Ticket #1059 (JasperException: Unable to find setter method for attribute: direction ...) closed by Jari Häkkinen
worksforme: If this is an issue try another java RTE (tomcat with Oracle java RTE).
3:15 PM Ticket #775 (Refresh redirects) closed by Jari Häkkinen
wontfix
3:12 PM Ticket #683 (Holding down SHIFT, CTRL or ALT when creating a new item should ...) closed by Jari Häkkinen
wontfix
3:04 PM Ticket #1258 (New export format for bioassay set spot data) closed by Jari Häkkinen
wontfix
3:02 PM Ticket #1135 (Create plug-in for importing raw data to multiple raw bioassays in one go) closed by Jari Häkkinen
wontfix
2:58 PM Ticket #450 (Plugin for importing Imagene raw data) closed by Jari Häkkinen
wontfix: No data has appeared.
2:54 PM Ticket #1438 (Installation wizard) closed by Jari Häkkinen
wontfix
2:51 PM Ticket #1342 (Fix message sending in InternalStorageController) closed by Jari Häkkinen
wontfix: We have gotten this far without this implement so why spend the time on it?
2:50 PM Ticket #1339 (Implement the net.sf.basedb.util.Tree.equals() method) closed by Jari Häkkinen
wontfix: We have gotten this far without this implement so why spend the time on it?
2:47 PM Ticket #653 (Implement DbControl.flush() method) closed by Jari Häkkinen
wontfix: We have gotten this far without this implement so why spend the time on it?
2:44 PM Ticket #571 (Allow spot image generator to use any layer in multi-image TIFF file) closed by Jari Häkkinen
wontfix: Spot images are obsolete in BASE context.
2:42 PM Ticket #185 (Refactor the Item class and DbControl and more...) closed by Jari Häkkinen
wontfix: Not needed in foreseeable future

Nov 1, 2013:

11:32 AM Tickets #1729,​1730 batch updated by Nicklas Nordborg
(In [6342]) References #1729 and #1730. Moved Main.show(), …
11:32 AM Changeset [6342] by Nicklas Nordborg
References #1729 and #1730. Moved Main.show(), Main.hide() and …

Oct 31, 2013:

2:16 PM Ticket #1778 (Can't re-install an extension with an error) closed by Nicklas Nordborg
fixed: (In [6341]) Fixes #1778: Can't re-install an extension with an error …
2:16 PM Changeset [6341] by Nicklas Nordborg
Fixes #1778: Can't re-install an extension with an error Added the …
1:54 PM Ticket #1777 (Error messages for extensions that fail to install are forgotten after ...) closed by Nicklas Nordborg
fixed: (In [6340]) Fixes #1777: Error messages for extensions that fail to …
1:54 PM Changeset [6340] by Nicklas Nordborg
Fixes #1777: Error messages for extensions that fail to install are …
10:49 AM Ticket #1778 (Can't re-install an extension with an error) created by Nicklas Nordborg
This is slightly related to #1777. To re-produce, follow the procedure …
9:56 AM Ticket #1777 (Error messages for extensions that fail to install are forgotten after ...) created by Nicklas Nordborg
This issue is a bit hard to reproduce, but the outline is a follows: …

Oct 30, 2013:

11:42 AM Ticket #1776 (Change sort order for extract in physical bioassays edit dialog) closed by Nicklas Nordborg
fixed: (In [6339]) Fixes #1776: Change sort order for extract in physical …
11:42 AM Changeset [6339] by Nicklas Nordborg
Fixes #1776: Change sort order for extract in physical bioassays edit …
11:37 AM Ticket #1776 (Change sort order for extract in physical bioassays edit dialog) created by Nicklas Nordborg
The list that display the parent extract in the edit dialog for …
9:03 AM Ticket #1775 (Selecting items from a table return the ID as a string) closed by Nicklas Nordborg
fixed: (In [6338]) Fixes #1775: Selecting items from a table return the ID as …
9:03 AM Changeset [6338] by Nicklas Nordborg
Fixes #1775: Selecting items from a table return the ID as a string
8:50 AM Ticket #1775 (Selecting items from a table return the ID as a string) created by Nicklas Nordborg
This is usually not a big deal since selected values are simple …
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