Timeline



Oct 7, 2009:

8:51 AM Ticket #1374 (Caching of experimental factors) updated by Nicklas Nordborg
Arrrggghhh... there are some annoying problems... The auto-detection …

Oct 6, 2009:

7:12 PM Ticket #1399 (Array slide's create multiple puts a wrong number into batch index field) updated by Nicklas Nordborg
Milestone changed
You are right. The array batch id should not be used as the batch …
3:15 PM Ticket #1399 (Array slide's create multiple puts a wrong number into batch index field) updated by base
Problematic assignments are in file …
3:01 PM Ticket #1399 (Array slide's create multiple puts a wrong number into batch index field) created by base
I noticed that when one uses Create multiple wizard on Array Slide …
2:09 PM Ticket #1398 (File tree filter) created by base
It would be great to have a little project-filter in the directory …
12:56 PM Ticket #1374 (Caching of experimental factors) updated by Nicklas Nordborg
The reporter search was already optimised in #903. The remaining issue …
12:40 PM Ticket #1374 (Caching of experimental factors) updated by Johan Vallon-Christersson
Replying to nicklas: > Changes to the 'inherit …
12:38 PM Ticket #1397 (Function to inherit annotations for all experimental factors in the ...) created by Johan Vallon-Christersson
This ticket elaborate on some points raised in ticket:1374
12:18 PM Ticket #1374 (Caching of experimental factors) updated by Johan Vallon-Christersson
Replying to nicklas: > Initial test results indicate that …
12:07 PM Ticket #1396 (Using item properties as experimental factors - how could this be ...) updated by Nicklas Nordborg
Yes that should be possible. It can sort of be done with the current …
11:25 AM Ticket #1396 (Using item properties as experimental factors - how could this be ...) updated by Johan Vallon-Christersson
Just playing with thoughts of how the described user functionality …
11:06 AM Ticket #1374 (Caching of experimental factors) updated by Nicklas Nordborg
Changes to the 'inherit annotations' functionality should go into a …

Oct 5, 2009:

10:14 PM Ticket #1396 (Using item properties as experimental factors - how could this be ...) updated by Nicklas Nordborg
Milestone changed
This will not be possible in the current version. Might be considered …
6:17 PM Ticket #1396 (Using item properties as experimental factors - how could this be ...) updated by Johan Vallon-Christersson
Description changed
6:13 PM Ticket #1396 (Using item properties as experimental factors - how could this be ...) created by Johan Vallon-Christersson
Would it be possible to somehow make item properties (or some selected …
5:32 PM Ticket #1374 (Caching of experimental factors) updated by Johan Vallon-Christersson
Replying to nicklas: > > Would it be possible to have a …
4:40 PM Ticket #1374 (Caching of experimental factors) updated by Nicklas Nordborg
> Would it be possible to present the cache date... The date will be …
3:45 PM Ticket #1374 (Caching of experimental factors) updated by Johan Vallon-Christersson
Would it be possible to present the cache date to the user in the web …
11:41 AM Ticket #1374 (Caching of experimental factors) updated by Nicklas Nordborg
Owner, Priority, Status changed
Here is the idea: The offending method is probably the …
9:27 AM Changeset [5117] by Nicklas Nordborg
Fixes #1394: Inherit annotations (Experimental factors) not available …
9:27 AM Ticket #1394 (Inherit annotations (Experimental factors) not available for ...) closed by Nicklas Nordborg
fixed: (In [5117]) Fixes #1394: Inherit annotations (Experimental factors) …
9:22 AM Ticket #1394 (Inherit annotations (Experimental factors) not available for ...) updated by Nicklas Nordborg
Priority, Status, Type, Owner, Milestone changed
9:20 AM Ticket #1347 (Enable Appearance feature 'Display long text' in Experiment - ...) updated by Nicklas Nordborg
Milestone, Priority changed
9:19 AM Changeset [5116] by Nicklas Nordborg
Fixes #1347: Enable Appearance feature 'Display long text' in …
9:19 AM Ticket #1347 (Enable Appearance feature 'Display long text' in Experiment - ...) updated by Nicklas Nordborg
Resolution changed
(In [5116]) Fixes #1347: Enable Appearance feature 'Display long text' …
8:54 AM Ticket #1395 (Exerimental factors table width should not be determined by ...) updated by Nicklas Nordborg
Priority, Milestone changed
8:54 AM Ticket #1395 (Exerimental factors table width should not be determined by ...) closed by Nicklas Nordborg
fixed: (In [5115]) Fixes #1395: Exerimental factors table width should not be …
8:54 AM Changeset [5115] by Nicklas Nordborg
Fixes #1395: Exerimental factors table width should not be determined …

Oct 2, 2009:

6:25 PM Ticket #1395 (Exerimental factors table width should not be determined by ...) updated by Nicklas Nordborg
The width of tables are always 100% wide so if there is something that …
6:19 PM Ticket #1347 (Enable Appearance feature 'Display long text' in Experiment - ...) updated by Nicklas Nordborg
Hmmm... I don't know. The table is generated with empty cells on the …
5:01 PM width.png attached to Ticket #1395 by Johan Vallon-Christersson
4:56 PM Ticket #1395 (Exerimental factors table width should not be determined by ...) created by Johan Vallon-Christersson
Use case: An Experiment with 70 Experimental factors will have a …
4:42 PM Used values column.png attached to Ticket #1347 by Johan Vallon-Christersson
4:42 PM Ticket #1347 (Enable Appearance feature 'Display long text' in Experiment - ...) updated by Johan Vallon-Christersson
Replying to nicklas: > No, the description in the posted …
2:29 PM Changeset [5114] by Nicklas Nordborg
References #1386: Plot function in the bioassay table in experiment …
2:29 PM Ticket #1386 (Plot function in the bioassay table in experiment explorer) updated by Nicklas Nordborg
(In [5114]) References #1386: Plot function in the bioassay table in …
11:59 AM Ticket #1023 (Add support for using regular expressions when filtering lists) updated by Jari Häkkinen
Milestone changed
11:59 AM Ticket #456 (Mass edit) updated by Jari Häkkinen
Milestone changed
11:59 AM Ticket #982 (Wrong destination (for shared to user) from link to directory from ...) updated by Jari Häkkinen
Milestone changed
11:58 AM Ticket #966 (Registered and possibly last updated – add to all/most items) updated by Jari Häkkinen
Milestone changed
11:57 AM Ticket #727 (Add presentations and publications to the wiki) updated by Jari Häkkinen
Milestone changed
8:36 AM Changeset [5113] by Jari Häkkinen
Refs #1393. Bumped tomcat version requirement.
8:36 AM Ticket #1393 (The "Edit file" function should check the size after loading/before saving) updated by Jari Häkkinen
(In [5113]) Refs #1393. Bumped tomcat version requirement.
8:23 AM Ticket #1393 (The "Edit file" function should check the size after loading/before saving) closed by Nicklas Nordborg
fixed: (In [5112]) Fixes #1393: The "Edit file" function should check the …
8:23 AM Changeset [5112] by Nicklas Nordborg
Fixes #1393: The "Edit file" function should check the size after …
7:45 AM Ticket #1393 (The "Edit file" function should check the size after loading/before saving) updated by Nicklas Nordborg
I can reproduce this on my development machine now. But only after …

Oct 1, 2009:

9:38 PM Ticket #1394 (Inherit annotations (Experimental factors) not available for ...) updated by Nicklas Nordborg
It's better to use the 'string' annotation type if there is only 10 …
7:13 PM Ticket #1394 (Inherit annotations (Experimental factors) not available for ...) updated by Johan Vallon-Christersson
Replying to nicklas: > Hmmm.... the function to …
4:40 PM Ticket #1394 (Inherit annotations (Experimental factors) not available for ...) updated by Nicklas Nordborg
Hmmm.... the function to automatically inherit annotation builds on …
3:56 PM Ticket #1394 (Inherit annotations (Experimental factors) not available for ...) created by Johan Vallon-Christersson
The functionality that allow rawbioassays to inherit experimental …
3:27 PM Ticket #1393 (The "Edit file" function should check the size after loading/before saving) updated by Nicklas Nordborg
It is something on the server side. I made a test on the production …
2:31 PM Ticket #1393 (The "Edit file" function should check the size after loading/before saving) updated by Nicklas Nordborg
Description changed
2:29 PM Ticket #1393 (The "Edit file" function should check the size after loading/before saving) updated by Nicklas Nordborg
Tested with an UTF-8 encoded file and there is no problem with it …
2:15 PM Ticket #1393 (The "Edit file" function should check the size after loading/before saving) updated by Nicklas Nordborg
Hmmm... I just realized that checking the number of bytes …
1:35 PM Ticket #1386 (Plot function in the bioassay table in experiment explorer) updated by Johan Vallon-Christersson
Replying to nicklas: Perhaps then provide the option to …
1:19 PM Ticket #1393 (The "Edit file" function should check the size after loading/before saving) created by Nicklas Nordborg
The "Edit file" function is useful for editing text files below 100kb …
1:14 PM Ticket #1392 (Incorrect warning about non-default platform/variant from validator) created by Nicklas Nordborg
Setup a project and an array design as follows: * Create a new …
12:05 PM Ticket #1386 (Plot function in the bioassay table in experiment explorer) updated by Nicklas Nordborg
Regarding the plot. It is still only a quick-and-dirty with lots of …
11:50 AM Ticket #1386 (Plot function in the bioassay table in experiment explorer) updated by Johan Vallon-Christersson
Replying to nicklas: > 2. Create one series for each …
11:40 AM Ticket #1386 (Plot function in the bioassay table in experiment explorer) updated by Johan Vallon-Christersson
Replying to nicklas: > There are two options: > I'm in …
11:01 AM Ticket #1386 (Plot function in the bioassay table in experiment explorer) updated by Nicklas Nordborg
Hmmm... I just also realized that we do not force bioassay names to …
10:57 AM series-per-position.png attached to Ticket #1386 by Nicklas Nordborg
Example showing one series per position when "all" is selected
10:57 AM Ticket #1386 (Plot function in the bioassay table in experiment explorer) updated by Nicklas Nordborg
Good news! JFreeChart can provide pixel coordinate information and it …

Sep 30, 2009:

1:23 PM Ticket #1386 (Plot function in the bioassay table in experiment explorer) updated by Nicklas Nordborg
Status, Milestone, Owner changed
The plot itself should not be too difficult to create. The colored …
12:56 PM Changeset [5111] by Nicklas Nordborg
Fixes #1380 and #1381: Customize visible reporter fields in experiment …
12:56 PM Tickets #1380,​1381 batch updated by Nicklas Nordborg
fixed: (In [5111]) Fixes #1380 and #1381: Customize visible reporter fields …
12:39 PM Ticket #1347 (Enable Appearance feature 'Display long text' in Experiment - ...) closed by Nicklas Nordborg
worksforme: No, the description in the posted image is not expected to be hidden. …
11:55 AM Ticket #1347 (Enable Appearance feature 'Display long text' in Experiment - ...) reopened by Johan Vallon-Christersson
11:54 AM Experiment-properties-tab.png attached to Ticket #1347 by Johan Vallon-Christersson
11:54 AM Ticket #1347 (Enable Appearance feature 'Display long text' in Experiment - ...) updated by Johan Vallon-Christersson
Replying to nicklas: > This already works for me in …
11:33 AM Ticket #1325 (Lists of items (similar funcion as biomaterial lists)) updated by Johan Vallon-Christersson
Replying to nicklas: > If we are going to do this it …

Sep 29, 2009:

12:33 PM Ticket #1380 (Customize visible reporter fields in experiment explorer) updated by Johan Vallon-Christersson
Replying to nicklas: > I don't think it matters …
12:28 PM Ticket #1384 (Move the annotation summary information table in experiment explorer) updated by Johan Vallon-Christersson
Beautiful!
12:25 PM Changeset [5110] by Jari Häkkinen
Added entry to the FAQ.
12:12 PM Ticket #1391 (The import button in experiment overview when all raw bioassays are ...) updated by Jari Häkkinen
Hm, I suppose this should enter the FAQ section.
11:31 AM Ticket #1391 (The import button in experiment overview when all raw bioassays are ...) closed by Nicklas Nordborg
wontfix: This is a standardized message appearing at all places were no plug-in …
11:21 AM Changeset [5109] by Nicklas Nordborg
Fixes #1390: Annotation groups should be sorted according to title
11:21 AM Ticket #1390 (Annotation groups should be sorted according to title) closed by Nicklas Nordborg
fixed: (In [5109]) Fixes #1390: Annotation groups should be sorted according …
11:10 AM Ticket #1391 (The import button in experiment overview when all raw bioassays are ...) created by Jari Häkkinen
The message says […] The issue is really that BASE cannot find any …
11:06 AM Ticket #1390 (Annotation groups should be sorted according to title) updated by Nicklas Nordborg
Owner, Status changed
11:06 AM Ticket #1390 (Annotation groups should be sorted according to title) created by Nicklas Nordborg
The annotation groups are sorted in a semi-random order. The order …
11:04 AM Changeset [5108] by Nicklas Nordborg
Fixes #1389: Cache annotation summary groups in experiment explorer
11:04 AM Ticket #1389 (Cache annotation summary groups in experiment explorer) closed by Nicklas Nordborg
fixed: (In [5108]) Fixes #1389: Cache annotation summary groups in experiment …
10:46 AM summary.png attached to Ticket #1384 by Nicklas Nordborg
The current implementation looks like this
10:43 AM Ticket #1380 (Customize visible reporter fields in experiment explorer) updated by Nicklas Nordborg
I don't think it matters implementation-wise. The current column …
10:26 AM Ticket #1384 (Move the annotation summary information table in experiment explorer) updated by Johan Vallon-Christersson
Replying to nicklas: The text itself should of course not …
10:12 AM Ticket #1380 (Customize visible reporter fields in experiment explorer) updated by Johan Vallon-Christersson
Replying to nicklas: > > To have it synchronized makes a …
9:53 AM Ticket #1389 (Cache annotation summary groups in experiment explorer) updated by Nicklas Nordborg
Owner, Status changed
9:53 AM Ticket #1389 (Cache annotation summary groups in experiment explorer) created by Nicklas Nordborg
This may be related to #1387. Currently, new AnnotationSummary
9:49 AM Changeset [5107] by Nicklas Nordborg
Fixes #1388: Display the count for each group in the annotation …
9:49 AM Ticket #1388 (Display the count for each group in the annotation summary in ...) closed by Nicklas Nordborg
fixed: (In [5107]) Fixes #1388: Display the count for each group in the …
9:41 AM Ticket #1388 (Display the count for each group in the annotation summary in ...) updated by Nicklas Nordborg
Owner, Status changed
9:41 AM Ticket #1388 (Display the count for each group in the annotation summary in ...) created by Nicklas Nordborg
9:40 AM Tickets #1382,​1384 batch updated by Nicklas Nordborg
fixed: (In [5106]) Fixes #1382 and #1384: Move annotation summary selection …
9:40 AM Changeset [5106] by Nicklas Nordborg
Fixes #1382 and #1384: Move annotation summary selection and tables
8:41 AM Ticket #1382 (Move the annotation summary selection list in experiment explorer) updated by Nicklas Nordborg
Status, Owner changed
8:41 AM Ticket #1384 (Move the annotation summary information table in experiment explorer) updated by Nicklas Nordborg
Status, Owner changed

Sep 28, 2009:

7:11 PM Ticket #1384 (Move the annotation summary information table in experiment explorer) updated by Nicklas Nordborg
I don't think it is possible to have vertically oriented text in the …
7:08 PM Ticket #1380 (Customize visible reporter fields in experiment explorer) updated by Nicklas Nordborg
> To have it synchronized makes a lot of sense since there would be no …
6:23 PM summarydata.pdf attached to Ticket #1384 by Johan Vallon-Christersson
6:23 PM Ticket #1384 (Move the annotation summary information table in experiment explorer) updated by Johan Vallon-Christersson
Replying to nicklas: > I am not sure I like this idea... …
5:26 PM Ticket #1380 (Customize visible reporter fields in experiment explorer) updated by Johan Vallon-Christersson
Replying to nicklas: > Should this be synchronized with …
4:09 PM plotfunction_EE_box.pdf attached to Ticket #1385 by Johan Vallon-Christersson
4:09 PM Ticket #1385 (Plot function in the annotation summary table in experiment explorer) updated by Johan Vallon-Christersson
Example in pdf file
3:17 PM plotfunctionEExplorer.pdf attached to Ticket #1386 by Johan Vallon-Christersson
3:16 PM Ticket #1386 (Plot function in the bioassay table in experiment explorer) updated by Johan Vallon-Christersson
Added a pdf with some descriptions and manually created example plots.
2:53 PM Changeset [5105] by Nicklas Nordborg
Fixes #1383: Make it possible to select more than one annotation in …
2:53 PM Ticket #1383 (Make it possible to select more than one annotation in experiment explorer) closed by Nicklas Nordborg
fixed: (In [5105]) Fixes #1383: Make it possible to select more than one …
12:33 PM Ticket #1383 (Make it possible to select more than one annotation in experiment explorer) updated by Nicklas Nordborg
Status, Owner changed
12:33 PM Ticket #1380 (Customize visible reporter fields in experiment explorer) updated by Nicklas Nordborg
Should this be synchronized with the columns in the "Reporter search" …
11:39 AM Ticket #1372 (Item link in the 'Overview' tab should use the regular click-to-view ...) closed by Nicklas Nordborg
fixed: (In [5104]) Fixes #1372: Item link in the 'Overview' tab should use …
11:39 AM Changeset [5104] by Nicklas Nordborg
Fixes #1372: Item link in the 'Overview' tab should use the regular …
11:39 AM Ticket #1372 (Item link in the 'Overview' tab should use the regular click-to-view ...) updated by Nicklas Nordborg
Status, Owner, Summary changed
10:45 AM Ticket #1379 (Change default minimum intensity value and add support for 0=all ...) closed by Nicklas Nordborg
fixed: (In [5103]) Fixes #1379: Change default minimum intensity value and …
10:45 AM Changeset [5103] by Nicklas Nordborg
Fixes #1379: Change default minimum intensity value and add support …
10:45 AM Ticket #1379 (Change default minimum intensity value and add support for 0=all ...) updated by Nicklas Nordborg
Summary changed
10:14 AM Ticket #1379 (Change default minimum intensity value and add support for 0=all ...) updated by Nicklas Nordborg
Owner, Status changed
9:04 AM Ticket #1325 (Lists of items (similar funcion as biomaterial lists)) updated by Nicklas Nordborg
If we are going to do this it should be a generic 'list-of-items' …
9:02 AM Ticket #1368 (Reload permissions when the refresh button is clicked) closed by Nicklas Nordborg
wontfix: This is the use case that lead to the 'Reload permissions' function …
8:59 AM Ticket #1384 (Move the annotation summary information table in experiment explorer) updated by Nicklas Nordborg
Milestone changed
I am not sure I like this idea... The table with spot data can grow a …
8:56 AM Ticket #1380 (Customize visible reporter fields in experiment explorer) updated by Nicklas Nordborg
Milestone changed
8:55 AM Ticket #1382 (Move the annotation summary selection list in experiment explorer) updated by Nicklas Nordborg
Milestone changed
8:54 AM Ticket #1381 (Trunkate long strings in experiment explorer) updated by Nicklas Nordborg
Milestone changed
8:53 AM Ticket #1383 (Make it possible to select more than one annotation in experiment explorer) updated by Nicklas Nordborg
Milestone changed
This should be rather simple to fix. …
8:45 AM Ticket #1384 (Move the annotation summary information table in experiment explorer) updated by Nicklas Nordborg
Summary changed
8:44 AM Ticket #1385 (Plot function in the annotation summary table in experiment explorer) updated by Nicklas Nordborg
I don't understand what kind of plot you would like. Please specify …
8:43 AM Ticket #1386 (Plot function in the bioassay table in experiment explorer) updated by Nicklas Nordborg
I am not sure that I understand what it is you would like to plot. Is …
8:39 AM Ticket #1387 (More performance enhancements needed for experiment explorer) updated by Nicklas Nordborg
Ticket #903 made lots of improvements to the experiment explorer. …
8:38 AM Ticket #1378 (Base1PluginExecuter should link the result directory with the ...) updated by Jari Häkkinen
Replying to nicklas: > This is not really related to …
8:33 AM Ticket #1375 (Improve experiment explorer display) closed by Nicklas Nordborg
duplicate: This ticket has been split into several new tickets as outlined in the …
8:31 AM Ticket #1387 (More performance enhancements needed for experiment explorer) updated by Nicklas Nordborg
Description changed
8:31 AM Ticket #1387 (More performance enhancements needed for experiment explorer) created by Nicklas Nordborg
Experiment explorer is still slow (cf ticket:903) and more performance …
8:30 AM Ticket #1375 (Improve experiment explorer display) updated by Nicklas Nordborg
Description changed
8:30 AM Ticket #1386 (Plot function in the bioassay table in experiment explorer) created by Nicklas Nordborg
A plot button in bioassay list header. 1. The plot should display …
8:29 AM Ticket #1375 (Improve experiment explorer display) updated by Nicklas Nordborg
Description changed
8:28 AM Ticket #1385 (Plot function in the annotation summary table in experiment explorer) created by Nicklas Nordborg
A plot button in annotation summary table. The plot should be a box …
8:26 AM Ticket #1375 (Improve experiment explorer display) updated by Nicklas Nordborg
Description changed
8:26 AM Ticket #1384 (Move the annotation summary information table in experiment explorer) created by Nicklas Nordborg
The annotation summary table should be created to the right of the …
8:25 AM Ticket #1383 (Make it possible to select more than one annotation in experiment explorer) created by Nicklas Nordborg
The annotation summary dropdown should be a selection where the user …
8:24 AM Ticket #1382 (Move the annotation summary selection list in experiment explorer) created by Nicklas Nordborg
Annotation summary dropdown menu should be moved between reporter …
8:22 AM Ticket #1375 (Improve experiment explorer display) updated by Nicklas Nordborg
Description changed
8:21 AM Ticket #1375 (Improve experiment explorer display) updated by Nicklas Nordborg
Description changed
8:21 AM Ticket #1381 (Trunkate long strings in experiment explorer) created by Nicklas Nordborg
The displayed reporter annotation fields should be truncated as …
8:20 AM Ticket #1380 (Customize visible reporter fields in experiment explorer) updated by Nicklas Nordborg
Description changed
8:19 AM Ticket #1376 (Remove the working directory (in the BASE file system) that ...) updated by Jari Häkkinen
Replying to nicklas: > I don't understand the request... …
8:19 AM Ticket #1380 (Customize visible reporter fields in experiment explorer) created by Nicklas Nordborg
The reporter annotation information display (Reporter View tab) should …
8:16 AM Ticket #1378 (Base1PluginExecuter should link the result directory with the ...) updated by Nicklas Nordborg
This is not really related to #1279. The directory in question is not …
8:09 AM Ticket #1373 (Permission denied exception when viewing item that has inherited an ...) closed by Nicklas Nordborg
fixed: (In [5102]) Fixes #1373: Permission denied exception when viewing item …
8:09 AM Changeset [5102] by Nicklas Nordborg
Fixes #1373: Permission denied exception when viewing item that has …
7:53 AM Ticket #1373 (Permission denied exception when viewing item that has inherited an ...) updated by Nicklas Nordborg
Summary changed
7:51 AM Ticket #1373 (Permission denied exception when viewing item that has inherited an ...) updated by Nicklas Nordborg
Owner, Status changed

Sep 25, 2009:

3:24 PM Ticket #1373 (Permission denied exception when viewing item that has inherited an ...) updated by Nicklas Nordborg
Type, Milestone changed
Hmmm... the problem seems to be in the list_annotations.jsp script …
2:34 PM Ticket #1376 (Remove the working directory (in the BASE file system) that ...) updated by Nicklas Nordborg
I don't understand the request... The directory is always needed, …

Sep 23, 2009:

1:21 PM Ticket #1379 (Change default minimum intensity value and add support for 0=all ...) created by Jari Häkkinen
In BASE2 plugin 'Normalization: Median ratio', parameter Blockgroup …
11:34 AM DownloadPage edited by Jari Häkkinen
Updated link for BASE 1.2 download (diff)

Sep 22, 2009:

10:16 AM Ticket #1378 (Base1PluginExecuter should link the result directory with the ...) created by Jari Häkkinen
Related to ticket:1279 When a BASE1 plug-in stores result files the …

Sep 18, 2009:

11:43 AM Ticket #1377 (Filter item lists on the 'Shared to' column) updated by Nicklas Nordborg
Sorting is not possible to implement since an item may be shared to …
11:29 AM Ticket #1377 (Filter item lists on the 'Shared to' column) created by Jari Häkkinen
... we simply need such a feature.
9:55 AM Ticket #1376 (Remove the working directory (in the BASE file system) that ...) created by Jari Häkkinen
The directories should only be created if needed. All BASE1 plug-ins …

Sep 17, 2009:

3:07 PM annotations_summary.png attached to Ticket #1375 by Jari Häkkinen
3:07 PM Ticket #1375 (Improve experiment explorer display) created by Jari Häkkinen
This ticket can be split to several tickets but we choose to write …
11:31 AM Ticket #1374 (Caching of experimental factors) created by Jari Häkkinen
The experiment properties view takes a long time to appear when there …
11:18 AM Ticket #1372 (Item link in the 'Overview' tab should use the regular click-to-view ...) updated by Nicklas Nordborg
There is a reason for this. The view pages will replace the overview …
11:09 AM Ticket #1373 (Permission denied exception when viewing item that has inherited an ...) created by Jari Häkkinen
The scenario: UserA has a rawbioassay RBA derived from SampleA (path: …
10:48 AM Ticket #1372 (Item link in the 'Overview' tab should use the regular click-to-view ...) created by Jari Häkkinen
I have a suggestion to a small behaviour change in the GUI. …

Sep 15, 2009:

8:22 AM Ticket #1366 (Manual transform creator should have option to import data from BASEfile:s) updated by Nicklas Nordborg
(In [5101]) References #1366: Manual transform creator should have …
8:22 AM Changeset [5101] by Nicklas Nordborg
References #1366: Manual transform creator should have option to …
8:12 AM Ticket #1371 (Update the database overview) closed by Nicklas Nordborg
fixed: (In [5100]) Fixes #1371: Update the database overview
8:12 AM Changeset [5100] by Nicklas Nordborg
Fixes #1371: Update the database overview
7:50 AM Ticket #1371 (Update the database overview) updated by Nicklas Nordborg
Status, Owner changed
7:50 AM Ticket #1371 (Update the database overview) created by Nicklas Nordborg
http://base.thep.lu.se/chrome/site/latest/html/developerdoc/api/api_ove

Sep 14, 2009:

12:14 PM Changeset [5099] by Nicklas Nordborg
Fixes #1370: The <base:icon> taglib should support absolute image url:s
12:14 PM Ticket #1370 (The <base:icon> taglib should support absolute image url:s) closed by Nicklas Nordborg
fixed: (In [5099]) Fixes #1370: The <base:icon> taglib should support …
11:24 AM Ticket #1370 (The <base:icon> taglib should support absolute image url:s) updated by Nicklas Nordborg
Status, Owner changed
11:24 AM Ticket #1370 (The <base:icon> taglib should support absolute image url:s) created by Nicklas Nordborg
This taglib currently assumes that all images are in the …
10:45 AM Ticket #1369 (A new array design does not get a registered date) updated by Jari Häkkinen
Replying to nicklas: > No problem with the RawBioAssay …
8:46 AM Changeset [5098] by Nicklas Nordborg
Fixes #1369: A new array design does not get a registered date No …
8:46 AM Ticket #1369 (A new array design does not get a registered date) closed by Nicklas Nordborg
fixed: (In [5098]) Fixes #1369: A new array design does not get a registered …
8:44 AM Changeset [5097] by Nicklas Nordborg
Fixes #1367: Changing permissions on an item should trigger a reload …
8:44 AM Ticket #1367 (Changing permissions on an item should trigger a reload of the cached ...) closed by Nicklas Nordborg
fixed: (In [5097]) Fixes #1367: Changing permissions on an item should …
8:29 AM Changeset [5096] by Nicklas Nordborg
Fixes #1366: Manual transform creator should have option to import …
8:29 AM Ticket #1366 (Manual transform creator should have option to import data from BASEfile:s) closed by Nicklas Nordborg
fixed: (In [5096]) Fixes #1366: Manual transform creator should have option …

Sep 11, 2009:

11:50 AM Ticket #1366 (Manual transform creator should have option to import data from BASEfile:s) updated by Nicklas Nordborg
Hmmm... there is an unexpected problem. The importer created in #1365
8:51 AM Changeset [5095] by Nicklas Nordborg
References #1365: Move BASEFile import code to a separate class …
8:51 AM Ticket #1365 (Move BASEFile import code to a separate class) updated by Nicklas Nordborg
(In [5095]) References #1365: Move BASEFile import code to a separate …

Sep 10, 2009:

3:22 PM Ticket #1366 (Manual transform creator should have option to import data from BASEfile:s) updated by Nicklas Nordborg
Status, Owner changed
2:38 PM Tickets #1365,​741 batch updated by Nicklas Nordborg
(In [5094]) References #741 and #1365 Missed this file in [5093]
2:38 PM Changeset [5094] by Nicklas Nordborg
References #741 and #1365 Missed this file in [5093]
2:36 PM Changeset [5093] by Nicklas Nordborg
Fixes #1365: Move BASEFile import code to a separate class References …
2:36 PM Tickets #1365,​741 batch updated by Nicklas Nordborg
(In [5093]) Fixes #1365: Move BASEFile import code to a separate class …
10:24 AM Ticket #1369 (A new array design does not get a registered date) updated by Nicklas Nordborg
Component changed
It seems like this problem happens when selecting a platform with a …

Sep 9, 2009:

2:51 PM Ticket #1368 (Reload permissions when the refresh button is clicked) updated by Nicklas Nordborg
Then the reload function needs a complete redesign. Currently it is …
2:01 PM Ticket #1369 (A new array design does not get a registered date) updated by Jari Häkkinen
Hm, interesting. Check out 'noregdate design' owned by my admin account.
1:58 PM Ticket #1368 (Reload permissions when the refresh button is clicked) updated by Jari Häkkinen
Replying to nicklas: > Will this really be necessary if …
11:54 AM Ticket #1369 (A new array design does not get a registered date) updated by Nicklas Nordborg
It seems to work on the production server also. Look at the 'Test of …
11:36 AM Ticket #1369 (A new array design does not get a registered date) updated by Jari Häkkinen
Replying to nicklas: > I can't reproduce this. It works …
11:19 AM Ticket #1368 (Reload permissions when the refresh button is clicked) updated by Nicklas Nordborg
Will this really be necessary if #1367 is fixed?
11:16 AM Ticket #1367 (Changing permissions on an item should trigger a reload of the cached ...) updated by Nicklas Nordborg
Type, Summary changed
The "Reload permissions" function was implemented to solve exactly …
11:10 AM Ticket #1369 (A new array design does not get a registered date) updated by Nicklas Nordborg
I can't reproduce this. It works just fine when I try it in BASE 2.13.
10:10 AM Ticket #1369 (A new array design does not get a registered date) created by Jari Häkkinen
I am adding a new array design but there is no registered date …
9:57 AM Ticket #1368 (Reload permissions when the refresh button is clicked) created by Jari Häkkinen
In many cases the permissions are confusing for the users and users do …
9:54 AM Ticket #1367 (Changing permissions on an item should trigger a reload of the cached ...) created by Jari Häkkinen
The problem is straightforward; Create an item and share it to a …

Sep 8, 2009:

9:25 AM Changeset [5092] by Jari Häkkinen
Added 2009 to copyright
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