Timeline
Dec 24, 2007:
- 10:39 PM ReleaseProcedure edited by
- updating link to svndigest (diff)
Dec 20, 2007:
- 2:47 PM Changeset [4073] by
- References #636: Kill a running job Infrastructure for signal …
- 2:47 PM Ticket #636 (Kill a running job) updated by
- (In [4073]) References #636: Kill a running job Infrastructure for …
Dec 19, 2007:
- 4:10 PM Changeset [4072] by
- Fixes #762 Provide operators 'In' and 'Not in' when filtering a list
- 4:10 PM Ticket #762 (Provide operators 'In' and 'Not in' when filtering a list) closed by
- fixed: (In [4072]) Fixes #762 Provide operators 'In' and 'Not in' when …
- 2:58 PM Ticket #636 (Kill a running job) updated by
-
Status, Milestone changed
I'll start with this now. We had some discussions around the coffe … - 2:02 PM Ticket #762 (Provide operators 'In' and 'Not in' when filtering a list) updated by
- (In [4071]) References #762 The functionality is now completely …
- 2:02 PM Changeset [4071] by
- References #762 The functionality is now completely implemented. It …
- 1:52 PM Ticket #762 (Provide operators 'In' and 'Not in' when filtering a list) updated by
-
Status, Owner changed
- 9:42 AM Ticket #636 (Kill a running job) updated by
-
Description changed
Dec 18, 2007:
- 11:31 AM Changeset [4070] by
- Fixes #790: Job slot status information on job agent view
- 11:31 AM Ticket #790 (Job slot status information on job agent view) closed by
- fixed: (In [4070]) Fixes #790: Job slot status information on job agent view
- 10:56 AM Ticket #790 (Job slot status information on job agent view) updated by
-
Status, Priority, Milestone, Owner, Component changed
Dec 17, 2007:
- 11:11 AM Ticket #886 (Make sure that plug-in and web services examples can be downloaded ...) created by
- The current links are pointing to a temporary location. The packages …
- 11:05 AM DeveloperInformation edited by
- Added links to packages with example code (diff)
- 9:05 AM Changeset [4069] by
- References #880: Corrected @since annotation (=2.6)
- 9:05 AM Ticket #880 (Exclude reporters in Lowess) updated by
- (In [4069]) References #880: Corrected @since annotation (=2.6)
- 9:02 AM Ticket #880 (Exclude reporters in Lowess) closed by
- fixed: (In [4068]) Fixes #880: Exclude reporters in Lowess
- 9:02 AM Changeset [4068] by
- Fixes #880: Exclude reporters in Lowess
- 7:47 AM Ticket #880 (Exclude reporters in Lowess) updated by
-
Owner, Status changed
Dec 14, 2007:
- 4:48 PM Changeset [4067] by
- References #762 Updated PropertyFilter class to use the new operators.
- 4:48 PM Ticket #762 (Provide operators 'In' and 'Not in' when filtering a list) updated by
- (In [4067]) References #762 Updated PropertyFilter class to use the …
- 4:05 PM Changeset [4066] by
- Fixes #885
- 4:05 PM Ticket #885 (Base1PluginExecuter has to short string input field) closed by
- fixed: (In [4066]) Fixes #885
- 3:44 PM Ticket #885 (Base1PluginExecuter has to short string input field) updated by
-
Status, Milestone changed
- 3:44 PM Ticket #884 (Base1PluginExecuter has to short string input field) closed by
- duplicate: dupicate #885
- 3:37 PM Ticket #884 (Base1PluginExecuter has to short string input field) created by
- The string input field for jobparameters is set to default 255 but …
- 3:37 PM Ticket #885 (Base1PluginExecuter has to short string input field) created by
- The string input field for jobparameters is set to default 255 but …
- 2:50 PM Ticket #880 (Exclude reporters in Lowess) updated by
- In practical terms this means: * We need a boolean flag on the …
- 2:34 PM Changeset [4065] by
- Fixes #870 and #883: Overview plots and correction factor plots should …
- 2:34 PM Tickets #883,870 batch updated by
- fixed: (In [4065]) Fixes #870 and #883: Overview plots and correction factor …
- 2:33 PM Ticket #883 (Overview plots and correction factor plots should be loaded one by one) created by
- For background info, see #870: OutOfMemory when creating correction …
- 2:31 PM Changeset [4064] by
- Fixes #882: list_annotations.jsp has an extra </div> tag with no …
- 2:31 PM Ticket #882 (list_annotations.jsp has an extra </div> tag with no corresponding ...) closed by
- fixed: (In [4064]) Fixes #882: list_annotations.jsp has an extra </div> tag …
- 2:31 PM Ticket #882 (list_annotations.jsp has an extra </div> tag with no corresponding ...) created by
- 2:30 PM Changeset [4063] by
- Fixes #881: Page taglib with type="include" generates </html> tag
- 2:30 PM Ticket #881 (Page taglib with type="include" generates </html> tag) closed by
- fixed: (In [4063]) Fixes #881: Page taglib with type="include" generates …
- 2:30 PM Ticket #881 (Page taglib with type="include" generates </html> tag) updated by
-
Status, Owner, Summary changed
- 2:26 PM Ticket #881 (Page taglib with type="include" generates </html> tag) created by
- It is used for page parts which are included inside other pages. Thus …
- 1:51 PM Ticket #870 (OutOfMemory when creating correction factor plot) updated by
-
Status changed
- 1:12 PM Ticket #880 (Exclude reporters in Lowess) created by
- New parameter in Lowess: exclude reporters The user chooses a …
- 12:19 PM Ticket #870 (OutOfMemory when creating correction factor plot) updated by
- It seems like browsers today have a rather high number for 'max …
- 12:12 PM Changeset [4062] by
- Fixes #837: Lowess plugin. Error: Sum of weigths in line_fit is not …
- 12:12 PM Ticket #837 (Lowess plugin. Error: Sum of weigths in line_fit is not positive) closed by
- fixed: (In [4062]) Fixes #837: Lowess plugin. Error: Sum of weigths in …
- 12:09 PM Changeset [4061] by
- Fixes #838: Change default value of Blockgroup size to 0 in Lowess
- 12:09 PM Ticket #838 (Change default value of Blockgroup size to 0 in Lowess) closed by
- fixed: (In [4061]) Fixes #838: Change default value of Blockgroup size to 0 …
- 12:02 PM Ticket #879 (Add column holding the filename of last file used for updating ...) updated by
-
Description changed
- 12:00 PM Ticket #879 (Add column holding the filename of last file used for updating ...) updated by
-
Description changed
- 11:59 AM Ticket #879 (Add column holding the filename of last file used for updating ...) created by
- This is to simple let everyone know where the annotations are coming …
- 11:37 AM Ticket #838 (Change default value of Blockgroup size to 0 in Lowess) updated by
-
Owner, Status changed
- 10:58 AM Changeset [4060] by
- Fixes #878: Exporting files as a compressed archive may throw an …
- 10:58 AM Ticket #878 (Exporting files as a compressed archive may throw an exception if done ...) closed by
- fixed: (In [4060]) Fixes #878: Exporting files as a compressed archive may …
- 10:00 AM Ticket #878 (Exporting files as a compressed archive may throw an exception if done ...) updated by
-
Status changed
- 10:00 AM Ticket #878 (Exporting files as a compressed archive may throw an exception if done ...) created by
- Here is the stacktrace: […] This happens because the path up to …
- 9:55 AM Changeset [4059] by
- Fixes #749: TAR files with long files names are not supported
- 9:55 AM Ticket #749 (TAR files with long files names are not supported) closed by
- fixed: (In [4059]) Fixes #749: TAR files with long files names are not supported
- 8:13 AM Ticket #749 (TAR files with long files names are not supported) updated by
-
Owner, Status, Milestone changed
It seems like commons-compress is not making any progress at all. I'll …
Dec 13, 2007:
- 3:19 PM Ticket #762 (Provide operators 'In' and 'Not in' when filtering a list) updated by
- (In [4058]) References #762 Added four new Operators and started to …
- 3:19 PM Changeset [4058] by
- References #762 Added four new Operators and started to implement them …
- 1:45 PM Ticket #771 (Make annotations for Bioassays available in bioassay table within a ...) closed by
- fixed: (In [4057]) Fixes #771: Make annotations for Bioassays available in …
- 1:45 PM Changeset [4057] by
- Fixes #771: Make annotations for Bioassays available in bioassay table …
- 11:38 AM Ticket #771 (Make annotations for Bioassays available in bioassay table within a ...) updated by
-
Status changed
- 11:38 AM Ticket #771 (Make annotations for Bioassays available in bioassay table within a ...) updated by
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Status, Owner changed
- 11:28 AM Ticket #771 (Make annotations for Bioassays available in bioassay table within a ...) updated by
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Priority, Milestone, Component changed
I'll fix this so that experimental factor annotations can be displayed …
Dec 12, 2007:
- 4:09 PM Ticket #875 (Create Illumina SNP raw data type) updated by
-
Status, Owner changed
- 3:01 PM Ticket #874 (Plugin to create array designs from an Illumina bgx-file.) updated by
-
Priority changed
- 3:01 PM Ticket #875 (Create Illumina SNP raw data type) updated by
-
Priority changed
- 3:00 PM Ticket #868 (Support for chips with multiple arrays) updated by
-
Priority changed
- 3:00 PM Ticket #868 (Support for chips with multiple arrays) updated by
-
Priority, Description, Summary changed
- 2:58 PM Ticket #867 (Support for array designs without coordinate/position information for ...) updated by
-
Priority changed
- 2:58 PM Ticket #837 (Lowess plugin. Error: Sum of weigths in line_fit is not positive) updated by
-
Priority changed
- 2:57 PM Ticket #762 (Provide operators 'In' and 'Not in' when filtering a list) updated by
-
Priority changed
- 2:57 PM Ticket #639 (exportPureMatrix method) updated by
-
Priority changed
- 2:54 PM Ticket #875 (Create Illumina SNP raw data type) updated by
-
Summary changed
- 2:41 PM Ticket #874 (Plugin to create array designs from an Illumina bgx-file.) updated by
-
Description changed
- 2:40 PM Ticket #877 (Illumina SNP validator and meta-data extractor) created by
- The data files hsould be validated automagically and some data such as …
- 2:37 PM Ticket #875 (Create Illumina SNP raw data type) updated by
-
Summary changed
- 2:36 PM Ticket #874 (Plugin to create array designs from an Illumina bgx-file.) updated by
-
Description changed
- 2:34 PM Ticket #876 (Illumina plug-ins: Illumina expression raw data types comes from 2 sources) updated by
-
Description changed
- 2:34 PM Ticket #876 (Illumina plug-ins: Illumina expression raw data types comes from 2 sources) created by
- Illumina data is exported from the scanner or BeadStudio. The two …
- 2:29 PM Ticket #875 (Create Illumina SNP raw data type) created by
- Needed for SNP data from the Illumina platform. The raw files are to …
- 2:24 PM Ticket #874 (Plugin to create array designs from an Illumina bgx-file.) created by
- The plug-in needs a validator and meta-data extractor. Depends on …
- 2:22 PM Ticket #841 (Investigate BASE support for uploading files >2GB) updated by
-
Milestone changed
- 2:21 PM Ticket #837 (Lowess plugin. Error: Sum of weigths in line_fit is not positive) updated by
-
Milestone changed
A more informative printout is needed explaining why the normalization … - 2:14 PM Ticket #834 (Trashcan cannot be emptied) updated by
-
Milestone changed
- 2:09 PM Ticket #639 (exportPureMatrix method) updated by
-
Milestone changed
- 2:06 PM Ticket #791 (Plug-in execution time estimates) updated by
-
Milestone changed
- 2:05 PM Ticket #790 (Job slot status information on job agent view) updated by
-
Milestone changed
- 2:04 PM Ticket #742 (Refactor BioAssaySetExporter) updated by
-
Milestone changed
- 2:04 PM Ticket #741 (Refactor Base1PluginExecuter) updated by
-
Milestone changed
- 2:04 PM Ticket #738 (Implement file upload as a pure servlet) updated by
-
Status, Milestone, Owner changed
- 2:03 PM Ticket #636 (Kill a running job) updated by
-
Milestone changed
- 2:03 PM Ticket #621 (Write 'Plate' section) updated by
-
Milestone changed
- 2:02 PM Ticket #617 (Write plate management in array LIMS) updated by
-
Milestone changed
- 2:02 PM Ticket #597 (Read "Appendix: web.xml reference") updated by
-
Milestone changed
- 2:02 PM Ticket #585 (Make the BASE file system pluggable) updated by
-
Milestone changed
- 1:59 PM Ticket #436 (Create extension system for the web application) updated by
-
Milestone changed
- 1:57 PM Ticket #866 (Performance testing creating root Bioassay set) closed by
- wontfix
- 9:35 AM Changeset [4056] by
- Fixes #873: AbstractFlatFileImporter should use number of parsed bytes …
- 9:35 AM Ticket #873 (AbstractFlatFileImporter should use number of parsed bytes for ...) closed by
- fixed: (In [4056]) Fixes #873: AbstractFlatFileImporter should use number of …
- 9:23 AM Ticket #873 (AbstractFlatFileImporter should use number of parsed bytes for ...) updated by
-
Summary changed
- 9:23 AM Ticket #873 (AbstractFlatFileImporter should use number of parsed bytes for ...) updated by
-
Owner, Status changed
- 9:23 AM Ticket #873 (AbstractFlatFileImporter should use number of parsed bytes for ...) created by
- It currently uses the number of parsed characters, which may be …
- 9:20 AM Ticket #800 (Make the Illumina importer accept tab as data delimiter and comma as ...) closed by
- fixed: (In [4055]) Fixes #800: Make the Illumina importer accept tab as data …
- 9:20 AM Changeset [4055] by
- Fixes #800: Make the Illumina importer accept tab as data delimiter …
Dec 11, 2007:
- 1:27 PM Ticket #738 (Implement file upload as a pure servlet) updated by
-
Status, Owner changed
- 11:51 AM Ticket #865 (Progress reporter implementation should detect and handle negative ...) closed by
- fixed: (In [4054]) Fixes #865 Progress reporter implementation should detect …
- 11:51 AM Changeset [4054] by
- Fixes #865 Progress reporter implementation should detect and handle …
- 11:37 AM Ticket #800 (Make the Illumina importer accept tab as data delimiter and comma as ...) updated by
-
Status, Summary, Owner, Milestone changed
Ok, I just got this confirmed by other users. They also report that … - 9:25 AM Ticket #867 (Support for array designs without coordinate/position information for ...) updated by
- I have been thinking a bit about how to do this. Here is a first …
Dec 10, 2007:
- 3:50 PM Ticket #800 (Make the Illumina importer accept tab as data delimiter and comma as ...) updated by
- Sorry I forgot about this post for some time. I was somewhat unclear …
- 3:44 PM Ticket #870 (OutOfMemory when creating correction factor plot) updated by
- There is no activity in the server. I'm the only one that is logged …
- 2:47 PM Ticket #870 (OutOfMemory when creating correction factor plot) updated by
- Hmm... afterwards there is still 300MB that is used by something else. …
- 2:14 PM Ticket #867 (Support for array designs without coordinate/position information for ...) updated by
-
Owner, Status changed
- 1:39 PM Ticket #870 (OutOfMemory when creating correction factor plot) updated by
- This is the memory load. When I try to load the about page during the …
- 11:56 AM Changeset [4053] by
- Fixes #872: Auto-compression based on file extension should not be …
- 11:56 AM Ticket #872 (Auto-compression based on file extension should not be case sensitive) closed by
- fixed: (In [4053]) Fixes #872: Auto-compression based on file extension …
- 11:43 AM Changeset [4052] by
- Fixes #871: 'Roles' test program should use *.tar.bz2 files instead of …
- 11:43 AM Ticket #871 ('Roles' test program should use *.tar.bz2 files instead of *.bz2) closed by
- fixed: (In [4052]) Fixes #871: 'Roles' test program should use *.tar.bz2 …
- 11:42 AM Ticket #872 (Auto-compression based on file extension should not be case sensitive) created by
- This depends on the database engine since the extension matching is …
- 11:36 AM Ticket #408 (Implement FTP server) updated by
- The Apache team is working on a new FTP server software. It seems …
- 11:16 AM Ticket #871 ('Roles' test program should use *.tar.bz2 files instead of *.bz2) updated by
-
Owner, Status changed
- 11:16 AM Ticket #871 ('Roles' test program should use *.tar.bz2 files instead of *.bz2) created by
- The testdata for the 'roles' test program has used *.bz2 files. The …
- 10:01 AM Ticket #870 (OutOfMemory when creating correction factor plot) updated by
- Can't find any explicit calls to System.gc() from JFreeChart.
- 9:19 AM Ticket #870 (OutOfMemory when creating correction factor plot) updated by
- This can have other causes than actually being out of memory. The …
- 8:50 AM Ticket #869 (Upload + unpack of compressed file may corrupt data) updated by
- I want to add some more information about how I solved this bug. It …
- 8:22 AM Ticket #869 (Upload + unpack of compressed file may corrupt data) closed by
- fixed: (In [4051]) Fixes #869: Upload + unpack of compressed file may corrupt data
- 8:22 AM Changeset [4051] by
- Fixes #869: Upload + unpack of compressed file may corrupt data
- 7:55 AM Ticket #869 (Upload + unpack of compressed file may corrupt data) updated by
- After tons of debug output I think I have narrowed it down to the …
Dec 7, 2007:
- 5:22 PM Ticket #870 (OutOfMemory when creating correction factor plot) created by
- I get an OutOfMemoryError when I try to create correction factor plot, …
- 2:09 PM Ticket #865 (Progress reporter implementation should detect and handle negative ...) updated by
-
Owner, Status changed
- 1:57 PM Changeset [4050] by
- Fixes #864 Some core plug-ins report negative progress values in large …
- 1:57 PM Ticket #864 (Some core plug-ins report negative progress values in large experiments) closed by
- fixed: (In [4050]) Fixes #864 Some core plug-ins report negative progress …
- 11:26 AM Ticket #869 (Upload + unpack of compressed file may corrupt data) updated by
- An interesting note is that it seems to work if the compressed file is …
- 11:18 AM Ticket #869 (Upload + unpack of compressed file may corrupt data) updated by
-
Owner, Status changed
- 11:18 AM Ticket #869 (Upload + unpack of compressed file may corrupt data) updated by
-
Description changed
- 9:56 AM Ticket #869 (Upload + unpack of compressed file may corrupt data) created by
- When uploading some compressed files and selecting to decompress them …
- 9:06 AM Ticket #868 (Support for chips with multiple arrays) created by
- Illumina array slides are special in that they contain multiple …
- 8:51 AM Ticket #867 (Support for array designs without coordinate/position information for ...) created by
- This ticket has been replaced by #894. The current way of using an …
- 8:46 AM Ticket #864 (Some core plug-ins report negative progress values in large experiments) updated by
-
Status, Owner changed
- 8:29 AM Changeset [4049] by
- Changes for future release 2.6
Dec 6, 2007:
- 11:10 PM ReleaseProcedure edited by
- (diff)
- 11:08 PM Milestone BASE 2.5 completed
- Starting from this release, we will only support Java 6 (SDK 1.6), …
- 11:06 PM Changeset [4048] by
- Changes for future release 2.5.1.
- 11:01 PM Changeset [4047] by
- New stable minor version 2.5 branch.
- 11:00 PM DownloadPage edited by
- (diff)
- 10:51 PM DownloadPage edited by
- (diff)
- 10:50 PM DownloadPage edited by
- Releasing 2.5 (diff)
- 10:44 PM Changeset [4046] by
- Tagging version 2.5
- 10:42 PM ReleaseProcedure edited by
- (diff)
- 4:20 PM Changeset [4045] by
- Preparing release 2.5
- 4:15 PM Ticket #617 (Write plate management in array LIMS) updated by
-
Milestone, Summary changed
- 4:15 PM Ticket #727 (Add presentations and publications to the wiki) updated by
-
Milestone changed
- 3:09 PM Changeset [4044] by
- Addresses #693. Removed references to plain matrix in GUI.
- 3:09 PM Ticket #693 (Select import plug-in dialog should not display auto-detect option in ...) updated by
- (In [4044]) Addresses #693. Removed references to plain matrix in GUI.
- 3:04 PM Ticket #726 (Add nice screen shots to the documentation section in the wiki.) closed by
- fixed
- 3:04 PM Features edited by
- (diff)
- 3:02 PM Ticket #639 (exportPureMatrix method) updated by
-
Milestone, Owner, Status changed
- 3:00 PM Ticket #593 (Write "Appendix: Core plug-ins shipped with BASE") closed by
- fixed: (In [4043]) Fixes #593.
- 3:00 PM Changeset [4043] by
- Fixes #593.
- 2:42 PM Features edited by
- (diff)
- 2:42 PM Features edited by
- (diff)
- 2:40 PM Features edited by
- (diff)
- 2:39 PM Features edited by
- (diff)
- 2:21 PM Features edited by
- (diff)
- 2:07 PM Features edited by
- (diff)
- 2:01 PM Features edited by
- (diff)
- 1:53 PM Features edited by
- (diff)
- 1:53 PM Features edited by
- (diff)
- 1:52 PM Features edited by
- (diff)
- 1:50 PM Features edited by
- (diff)
- 1:36 PM Ticket #749 (TAR files with long files names are not supported) updated by
- A compiled JAR with the commons compress code can be found at: …
- 12:55 PM Changeset [4042] by
- Fixes problem with 'ant web.jsp' target if Tomcat 6 is used.
- 11:24 AM Ticket #866 (Performance testing creating root Bioassay set) created by
- Time taken for creating root Bioassay set in highly variable when …
- 11:12 AM Changeset [4041] by
- Fixes #863: Displayed rows in bioassay set table limited to 60 Was …
- 11:12 AM Ticket #863 (Displayed rows in bioassay set table limited to 60?) closed by
- fixed: (In [4041]) Fixes #863: Displayed rows in bioassay set table limited …
- 10:41 AM Ticket #865 (Progress reporter implementation should detect and handle negative ...) created by
- For a background see #864. Since external plug-ins are likely to have …
- 10:40 AM Ticket #864 (Some core plug-ins report negative progress values in large experiments) updated by
-
Description changed
- 10:40 AM Ticket #864 (Some core plug-ins report negative progress values in large experiments) created by
- In experiments where the number of spots is larger than ~20M, the …
- 10:35 AM Ticket #726 (Add nice screen shots to the documentation section in the wiki.) updated by
-
Status changed
- 10:32 AM Ticket #863 (Displayed rows in bioassay set table limited to 60?) created by
- In an experiment the Bioassay sets table will only display 60 rows. …
Dec 5, 2007:
- 4:49 PM Ticket #847 (Update javadoc) closed by
- fixed: (In [4040]) Fixes #847 Most of the missing javadocs tags have been …
- 4:49 PM Changeset [4040] by
- Fixes #847 Most of the missing javadocs tags have been added in the …
- 3:39 PM Changeset [4039] by
- References #850: SQL for checking schema version in BASE 1 should be …
- 3:39 PM Ticket #850 (SQL for checking schema version in BASE 1 should be externalized) updated by
- (In [4039]) References #850: SQL for checking schema version in BASE 1 …
- 3:38 PM Ticket #862 (Web services server doesn't return exceptions from methods marked as 'void') closed by
- fixed: (In [4038]) Fixes #862: Web services server doesn't return exceptions …
- 3:38 PM Changeset [4038] by
- Fixes #862: Web services server doesn't return exceptions from methods …
- 2:43 PM Ticket #862 (Web services server doesn't return exceptions from methods marked as 'void') updated by
-
Status, Owner changed
It also seems to work if, for example, athrows BaseExceptionis … - 2:16 PM Changeset [4037] by
- Fixes #861
- 2:16 PM Ticket #861 (Base1PluginExecuter doesn't return error stream) closed by
- fixed: (In [4037]) Fixes #861
- 2:08 PM Ticket #862 (Web services server doesn't return exceptions from methods marked as 'void') created by
- For example, trying to use the SessionService.login() method with an …
- 1:58 PM Ticket #861 (Base1PluginExecuter doesn't return error stream) updated by
-
Status changed
- 1:58 PM Ticket #861 (Base1PluginExecuter doesn't return error stream) created by
- When Base1Executer exits with status done the error strem is …
- 11:31 AM Ticket #294 (Performance testing: Plugin-in execution time) closed by
- fixed
- 11:26 AM Ticket #725 (Transfer all old documentation to the new wiki system.) updated by
-
Status, Owner, Milestone changed
- 11:23 AM Ticket #721 (Store data in files instead of in the database) closed by
- fixed
- 9:39 AM Changeset [4036] by
- Fixes #851: Migration doesn't transfer 'reportermap' wizzzard …
- 9:39 AM Ticket #851 (Migration doesn't transfer 'reportermap' wizzzard configurations) closed by
- fixed: (In [4036]) Fixes #851: Migration doesn't transfer 'reportermap' …
- 9:13 AM Ticket #860 (Migration should create File entries even if physical file doesn't ...) closed by
- fixed: (In [4035]) Fixes #860: Migration should create File entries even if …
- 9:13 AM Changeset [4035] by
- Fixes #860: Migration should create File entries even if physical file …
- 9:02 AM Ticket #851 (Migration doesn't transfer 'reportermap' wizzzard configurations) updated by
- There is also a problem with complex column mappings. BASE 2 no longer …
- 8:49 AM Ticket #860 (Migration should create File entries even if physical file doesn't ...) updated by
-
Status changed
- 8:49 AM Ticket #860 (Migration should create File entries even if physical file doesn't ...) created by
- If the physical file doesn't exists on the BASE 1 server nothing is …
- 8:21 AM Ticket #847 (Update javadoc) updated by
- (In [4034]) References #847 Updated some javadocs. Added some missing tags.
- 8:21 AM Changeset [4034] by
- References #847 Updated some javadocs. Added some missing tags.
Dec 4, 2007:
- 4:45 PM Ticket #859 (Downloading file from web services fails if the filename in BASE ...) closed by
- fixed: (In [4033]) Fixes #859 Downloading file from web services fails if the …
- 4:45 PM Changeset [4033] by
- Fixes #859 Downloading file from web services fails if the filename in …
- 4:12 PM Ticket #859 (Downloading file from web services fails if the filename in BASE ...) updated by
-
Status, Description changed
- 4:10 PM Ticket #859 (Downloading file from web services fails if the filename in BASE ...) created by
- This is probably because the file name is used as an element name in …
- 1:16 PM Changeset [4032] by
- Fixes #850: SQL for checking schema version in BASE 1 should be …
- 1:16 PM Ticket #850 (SQL for checking schema version in BASE 1 should be externalized) closed by
- fixed: (In [4032]) Fixes #850: SQL for checking schema version in BASE 1 …
- 1:10 PM Changeset [4031] by
- Removed debug output.
Dec 3, 2007:
- 1:29 PM Changeset [4030] by
- Fixes #858: Display database name when starting initdb and updatedb scripts
- 1:29 PM Ticket #858 (Display database name when starting initdb and updatedb scripts) closed by
- fixed: (In [4030]) Fixes #858: Display database name when starting initdb and …
- 1:05 PM Ticket #858 (Display database name when starting initdb and updatedb scripts) updated by
-
Status changed
- 1:05 PM Ticket #858 (Display database name when starting initdb and updatedb scripts) created by
- I often find myself trying to install or update the incorrect …
- 9:08 AM Ticket #854 (Extend test procedure for predefined roles) closed by
- fixed: Test runs worked fine.
- 8:45 AM Changeset [4029] by
- Fixes #856: Default platform / raw data type for a project is not used …
- 8:45 AM Ticket #856 (Default platform / raw data type for a project is not used when ...) closed by
- fixed: (In [4029]) Fixes #856: Default platform / raw data type for a project …
- 8:15 AM Ticket #856 (Default platform / raw data type for a project is not used when ...) updated by
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Status, Owner changed
Nov 30, 2007:
- 8:35 PM Ticket #857 (Javadoc for SessionService.newSession is misleading) updated by
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Milestone, Summary changed
Background information about this can be found at: … - 8:31 PM Changeset [4028] by
- References #857. Updated documentation
- 8:31 PM Ticket #857 (Javadoc for SessionService.newSession is misleading) updated by
- (In [4028]) References #857. Updated documentation
- 8:30 PM Ticket #857 (Javadoc for SessionService.newSession is misleading) closed by
- invalid: The client ID is an optional parameter as documented in: …
- 5:19 PM Changeset [4027] by
- Fixes #706
- 5:19 PM Ticket #706 (Averagemethod on raw data types) closed by
- fixed: (In [4027]) Fixes #706
- 4:37 PM Changeset [4026] by
- References #847 Updated some javadocs. Complemented with tags for some …
- 4:37 PM Ticket #847 (Update javadoc) updated by
- (In [4026]) References #847 Updated some javadocs. Complemented with …
- 4:37 PM Ticket #857 (Javadoc for SessionService.newSession is misleading) created by
- I don't know if this is a bug or a feature... When you call the WS …
- 3:08 PM Changeset [4025] by
- References #854: Extend test procedure for predefined roles Updated …
- 3:08 PM Ticket #854 (Extend test procedure for predefined roles) updated by
- (In [4025]) References #854: Extend test procedure for predefined …
- 12:21 PM Changeset [4024] by
- Correct a few typos.
- 11:05 AM Ticket #856 (Default platform / raw data type for a project is not used when ...) created by
- I have activated a project which has selected a default platform and …
- 11:04 AM Changeset [4023] by
- References #847 Updated some javadocs. Most of the thrown exceptions …
- 11:04 AM Ticket #847 (Update javadoc) updated by
- (In [4023]) References #847 Updated some javadocs. Most of the thrown …
- 9:10 AM Changeset [4022] by
- Fixes #855: &hellip is displayed in some menu items with IE Was …
- 9:10 AM Ticket #855 (&hellip is displayed in some menu items with IE) closed by
- fixed: (In [4022]) Fixes #855: &hellip is displayed in some menu items with …
- 9:08 AM Ticket #855 (&hellip is displayed in some menu items with IE) created by
- Help --> Help and Help --> Report a bug
- 9:02 AM Ticket #854 (Extend test procedure for predefined roles) updated by
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Owner, Status changed
- 9:02 AM Ticket #854 (Extend test procedure for predefined roles) created by
- http://base.thep.lu.se/browser/trunk/doc/test/roles/index.html?format=r …
- 8:37 AM Changeset [4021] by
- Fixes #853: Edit project members doesn't display correctly and …
- 8:37 AM Ticket #853 (Edit project members doesn't display correctly and generate javascript ...) closed by
- fixed: (In [4021]) Fixes #853: Edit project members doesn't display correctly …
- 8:36 AM Ticket #853 (Edit project members doesn't display correctly and generate javascript ...) created by
- The dialog for adding members to a project doesn't display correctly …
Nov 29, 2007:
- 4:43 PM Changeset [4020] by
- References #847 Updated some javadocs.
- 4:43 PM Ticket #847 (Update javadoc) updated by
- (In [4020]) References #847 Updated some javadocs.
- 2:53 PM Changeset [4019] by
- Fixes #852: Check if a file/directory already exists when moving a …
- 2:53 PM Ticket #852 (Check if a file/directory already exists when moving a file/directory ...) closed by
- fixed: (In [4019]) Fixes #852: Check if a file/directory already exists when …
- 2:46 PM Ticket #852 (Check if a file/directory already exists when moving a file/directory ...) updated by
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Status, Owner changed
- 2:46 PM Ticket #852 (Check if a file/directory already exists when moving a file/directory ...) created by
- Currently an ugly stack trace is displayed: […]
- 2:24 PM Ticket #851 (Migration doesn't transfer 'reportermap' wizzzard configurations) updated by
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Owner, Status changed
BASE 1 seems to define three column mappings for this importer that … - 2:16 PM Ticket #851 (Migration doesn't transfer 'reportermap' wizzzard configurations) updated by
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Description changed
- 2:14 PM Ticket #851 (Migration doesn't transfer 'reportermap' wizzzard configurations) created by
- From the mailing list by Pawel Sztromwasser: …
- 11:42 AM Ticket #850 (SQL for checking schema version in BASE 1 should be externalized) updated by
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Owner, Status changed
- 11:42 AM Ticket #850 (SQL for checking schema version in BASE 1 should be externalized) created by
- See …
- 11:18 AM Ticket #553 (Read "Javadoc" section) updated by
- (In [4018]) References #553: Read "Javadoc" section Grouped new …
- 11:18 AM Changeset [4018] by
- References #553: Read "Javadoc" section Grouped new packages into …
Nov 28, 2007:
- 3:44 PM Changeset [4017] by
- References #847 Updated some javadocs.
- 3:44 PM Ticket #847 (Update javadoc) updated by
- (In [4017]) References #847 Updated some javadocs.
- 2:27 PM Changeset [4016] by
- Fixes #553: Read "Javadoc" section
- 2:27 PM Ticket #553 (Read "Javadoc" section) closed by
- fixed: (In [4016]) Fixes #553: Read "Javadoc" section
- 1:55 PM Ticket #553 (Read "Javadoc" section) updated by
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Owner, Description, Status changed
- 1:48 PM Changeset [4015] by
- References #848: Removed unused import
- 1:48 PM Ticket #848 (Annotation importer should not require role-based WRITE permission to ...) updated by
- (In [4015]) References #848: Removed unused import
- 1:47 PM Changeset [4014] by
- Fixes #848: Annotation importer should not require role-based WRITE …
- 1:47 PM Ticket #848 (Annotation importer should not require role-based WRITE permission to ...) closed by
- fixed: (In [4014]) Fixes #848: Annotation importer should not require …
- 1:42 PM Ticket #848 (Annotation importer should not require role-based WRITE permission to ...) updated by
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Owner, Status, Type, Summary changed
- 1:39 PM Changeset [4013] by
- References #514: Change permissions in Power User Updated test …
- 1:39 PM Ticket #514 (Change permissions in Power User) updated by
- (In [4013]) References #514: Change permissions in Power User Updated …
- 1:37 PM Changeset [4012] by
- Fixes #849: Error when creating an experiment: Raw data types doesn't match
- 1:37 PM Ticket #849 (Error when creating an experiment: Raw data types doesn't match) closed by
- fixed: (In [4012]) Fixes #849: Error when creating an experiment: Raw data …
- 1:36 PM Ticket #849 (Error when creating an experiment: Raw data types doesn't match) updated by
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Priority, Summary changed
I have found the problem. The reason it doesn't work the second time … - 1:28 PM Ticket #849 (Error when creating an experiment: Raw data types doesn't match) updated by
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Status, Owner changed
- 1:15 PM Ticket #849 (Error when creating an experiment: Raw data types doesn't match) updated by
- I have an additional comment to make. Before trying to create the …
- 1:12 PM Ticket #849 (Error when creating an experiment: Raw data types doesn't match) created by
- 1. First you must have at least two Affymetrix raw bioassays. 2. Go …
- 12:11 PM Ticket #847 (Update javadoc) updated by
- (In [4011]) References #847 Updated some javadocs. Removed an …
- 12:11 PM Changeset [4011] by
- References #847 Updated some javadocs. Removed an exception, that is …
- 12:01 PM Ticket #848 (Annotation importer should not require role-based WRITE permission to ...) created by
- The required permission are usually only given to administrators. The …
Nov 27, 2007:
- 5:31 PM DownloadPage edited by
- (diff)
- 5:12 PM Changeset [4010] by
- Tagging release 2.5.0beta2
- 2:39 PM Changeset [4009] by
- References #822: Create a separate WS-client dist Use Apache …
- 2:39 PM Ticket #822 (Create a separate WS-client dist) updated by
- (In [4009]) References #822: Create a separate WS-client dist Use …
- 2:02 PM Changeset [4008] by
- Fixes #846: Add query parameters to QueryOptions
- 2:02 PM Ticket #846 (Add query parameters to QueryOptions) closed by
- fixed: (In [4008]) Fixes #846: Add query parameters to QueryOptions
- 1:36 PM Ticket #847 (Update javadoc) updated by
-
Status changed
- 1:36 PM Ticket #847 (Update javadoc) created by
- Some javadocs are missing one or several tags.
- 1:32 PM Ticket #846 (Add query parameters to QueryOptions) updated by
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Status, Owner changed
- 1:31 PM Ticket #846 (Add query parameters to QueryOptions) created by
- When doing a web services request with a restriction you currently …
- 1:07 PM Ticket #845 (Error message in list view of Array design:) closed by
- invalid: The error was caused by a null value on 'sortProperty' in the context. …
- 12:29 PM Changeset [4007] by
- References #806: Experimental factor values display on Experiment page …
- 12:29 PM Ticket #806 (Experimental factor values display on Experiment page can only display ...) updated by
- (In [4007]) References #806: Experimental factor values display on …
- 9:00 AM Tickets #721,844 batch updated by
- fixed: (In [4006]) Fixes #844: File.isUsed() doesn't check if a file has been …
- 9:00 AM Changeset [4006] by
- Fixes #844: File.isUsed() doesn't check if a file has been used in a …
- 8:56 AM Ticket #845 (Error message in list view of Array design:) created by
- could not resolve property: null of: …
- 8:36 AM Ticket #844 (File.isUsed() doesn't check if a file has been used in a FileSet.) updated by
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Status, Owner changed
- 8:25 AM Ticket #844 (File.isUsed() doesn't check if a file has been used in a FileSet.) updated by
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Owner, Status changed
Nov 26, 2007:
- 4:00 PM Changeset [4005] by
- Fixes #596 Read "Appendix: raw-data-types.xml reference"
- 4:00 PM Ticket #596 (Read "Appendix: raw-data-types.xml reference") closed by
- fixed: (In [4005]) Fixes #596 Read "Appendix: raw-data-types.xml reference"
- 2:39 PM Ticket #608 (Delete 'removed' items directly from list views) updated by
- (In [4004]) References #608: Delete 'removed' items directly from list …
- 2:39 PM Changeset [4004] by
- References #608: Delete 'removed' items directly from list views …
- 2:22 PM Changeset [4003] by
- Fixes #608: Delete 'removed' items directly from list views
- 2:22 PM Ticket #608 (Delete 'removed' items directly from list views) closed by
- fixed: (In [4003]) Fixes #608: Delete 'removed' items directly from list views
- 1:36 PM Ticket #596 (Read "Appendix: raw-data-types.xml reference") updated by
- (In [4002]) References #596
- 1:36 PM Changeset [4002] by
- References #596
- 1:08 PM Ticket #844 (File.isUsed() doesn't check if a file has been used in a FileSet.) created by
- The file is reported as not used, but when trying to delete it the …
- 1:07 PM Ticket #596 (Read "Appendix: raw-data-types.xml reference") updated by
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Status, Owner changed
- 1:04 PM Ticket #553 (Read "Javadoc" section) updated by
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Owner, Priority, Status, Summary changed
- 1:04 PM Changeset [4001] by
- Fixes #843: Display error message from original exception:s
- 1:04 PM Ticket #843 (Display error message from original exception:s) closed by
- fixed: (In [4001]) Fixes #843: Display error message from original exception:s
- 1:04 PM Ticket #843 (Display error message from original exception:s) created by
- When an exception that has linked exceptions is thrown only the …
- 1:03 PM Changeset [4000] by
- References #553 Write "Javadoc" section.
- 1:03 PM Ticket #553 (Read "Javadoc" section) updated by
- (In [4000]) References #553 Write "Javadoc" section.
- 12:36 PM Changeset [3999] by
- Fixes #842: PluginDefinition.isUsed() throws exception
- 12:36 PM Ticket #842 (PluginDefinition.isUsed() throws exception) closed by
- fixed: (In [3999]) Fixes #842: PluginDefinition.isUsed() throws exception
- 12:32 PM Ticket #842 (PluginDefinition.isUsed() throws exception) updated by
-
Owner, Status changed
- 12:32 PM Ticket #842 (PluginDefinition.isUsed() throws exception) created by
- Node '<query id="GET_JOBS_FOR_PLUGINDEFINITION">' was not found in …
- 11:26 AM Ticket #706 (Averagemethod on raw data types) updated by
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Cc, Status changed
- 10:02 AM Ticket #841 (Investigate BASE support for uploading files >2GB) created by
- A question about file upload of files > 2GB was recently asked on the …
- 9:28 AM Changeset [3998] by
- References #825: Include items 'shared to me' by default The default …
- 9:28 AM Ticket #825 (Fix bad documentation screenshots) updated by
- (In [3998]) References #825: Include items 'shared to me' by default …
- 8:23 AM Ticket #608 (Delete 'removed' items directly from list views) updated by
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Description, Priority, Milestone, Owner, Status changed
- 7:59 AM Ticket #840 (MeV leaves an unclosed DbControl) closed by
- fixed: (In [3997]) Fixes #840: MeV leaves an unclosed DbControl
- 7:59 AM Changeset [3997] by
- Fixes #840: MeV leaves an unclosed DbControl
- 7:58 AM Ticket #840 (MeV leaves an unclosed DbControl) created by
- Stacktrace from Tomcat logfile: […]
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