Opened 11 years ago

Closed 11 years ago

Last modified 11 years ago

#1366 closed enhancement (fixed)

Manual transform creator should have option to import data from BASEfile:s

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: BASE 2.14
Component: coreplugins Version:
Keywords: Cc:

Description

If a manual transform generates either a serial or matrix BASEfile there should be an option for importing the data into the database.

This ticket depends on #1365.

Change History (4)

comment:1 Changed 11 years ago by Nicklas Nordborg

Owner: changed from everyone to Nicklas Nordborg
Status: newassigned

comment:2 Changed 11 years ago by Nicklas Nordborg

Hmmm... there is an unexpected problem. The importer created in #1365 was designed for the kind of BASEfile:s generated by the Base1PluginExecuter. The BaseFileExporter plug-in generates slightly different files. The major difference is the column names which are more BASE 2-ish. Eg. Ch 1 instead of intensity1, etc. This makes it impossible to the use the manual transform plug-in without having to manually edit the column names in the generated BASEfile.

A small redesign of the new importer implementation is needed so that we can support user configuration of column names.

comment:3 Changed 11 years ago by Nicklas Nordborg

Resolution: fixed
Status: assignedclosed

(In [5096]) Fixes #1366: Manual transform creator should have option to import data from BASEfile:s

comment:4 Changed 11 years ago by Nicklas Nordborg

(In [5101]) References #1366: Manual transform creator should have option to import data from BASEfile:s

The child bioassay set was not saved when not importing data from the files.

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