GenePix raw data import (cy5/cy3) Configuration to import raw data from a genepix file(*.gpr). The wavelengths should be 635nm for channel_1 and 532nm for channel_2. yColumnMapping Y java.lang.String \Y\ propertyMapping.ch2BgMean Channel 2 background mean java.lang.String \B532 Mean\ propertyMapping.flags Flags java.lang.String \Flags\ propertyMapping.mValue M value java.lang.String \Log Ratio (635/532)\ trimQuotes Remove quotes java.lang.Boolean true propertyMapping.diameter Spot diameter java.lang.String \Dia.\ propertyMapping.ch2PercSat Percent saturated pixels java.lang.String \F532 % Sat.\ propertyMapping.ch1FgSd Channel 1 foreground standard deviation java.lang.String \F635 SD\ propertyMapping.ch2PercSd1 Percent pixels within 1 standard deviation java.lang.String \% > B532+1SD\ propertyMapping.fgPixels Foreground pixels java.lang.String \F Pixels\ propertyMapping.ch2FgSd Channel 2 foreground standard deviation java.lang.String \F532 SD\ propertyMapping.ch2BgSd Channel 2 background standard deviation java.lang.String \B532 SD\ headerRegexp Header java.lang.String "(.+)=(.*)" reporterIdColumnMapping Reporter ID java.lang.String \ID\ propertyMapping.ch1FgMedian Channel 1 foreground median java.lang.String \F635 Median\ propertyMapping.ch1BgMean Channel 1 background mean java.lang.String \B635 Mean\ propertyMapping.ch2BgMedian Channel 2 background median java.lang.String \B532 Median\ rowColumnMapping Row java.lang.String \Row\ propertyMapping.ch1BgMedian Channel 1 background median java.lang.String \B635 Median\ propertyMapping.ch2FgMean Channel 2 foreground mean java.lang.String \F532 Mean\ propertyMapping.rgnR2 Rgn R2 java.lang.String \Rgn R² (635/532)\ dataHeaderRegexp Data header java.lang.String "Block"\t"Column"\t"Row"\t"Name"\t"ID".*"Ratio of Medians \(635\/532\)".* propertyMapping.ratiosSd Standard deviation of ratios java.lang.String \Ratios SD (635/532)\ propertyMapping.ch2FgMedian Channel 2 foreground median java.lang.String \F532 Median\ propertyMapping.ch1PercSat Percent saturated pixels java.lang.String \F635 % Sat.\ dataSplitterRegexp Data splitter java.lang.String \t columnColumnMapping Column java.lang.String \Column\ propertyMapping.bgPixels Background pixels java.lang.String \B Pixels\ propertyMapping.ch1PercSd2 Percent pixels within 2 standard deviations java.lang.String \% > B635+2SD\ propertyMapping.ch1FgMean Channel 1 foreground mean java.lang.String \F635 Mean\ xColumnMapping X java.lang.String \X\ propertyMapping.ch1BgSd Channel 1 background standard deviation java.lang.String \B635 SD\ propertyMapping.rgnRatio Rgn ratio java.lang.String \Rgn Ratio (635/532)\ propertyMapping.ch1PercSd1 Percent pixels within 1 standard deviation java.lang.String \% > B635+1SD\ rawDataType Raw data type java.lang.String genepix propertyMapping.ch2PercSd2 Percent pixels within 2 standard deviations java.lang.String \% > B532+2SD\ blockColumnMapping Block java.lang.String \Block\