Tests was done on my development machine (auster). Results 
should not be compared to results made on other computers.

The test was made on a fresh installation of BASE 2.11 on 
MySQL 5.0.67 which was initialised with 100 raw data sets 
following the instructions in
http://base.thep.lu.se/wiki/Specifications/Test_procedures/Performance
Eg. './test.sh performance -n 100 raw'

The following tests were made from the web interface. The 
main purpose of the tests are to keep the result as a reference 
to make sure that any improvements we can do in the 
BioAssaySetExporter doesn't affect other things.

# = Number of assays
T1 = First run
T2 = Second run

Create root bioassay set
========================
formula: Mean FG - Median BG

# 	T1	T2
--------------------
10	1.27	2.12
20	3.19	3.53
40	5.48	6.53
80	16.55	12.13


Filter bioassay set
===================
formula: ch(1) > 0 && ch(2) > 0

#	T1	T2
--------------------
10	1.27	0.43
20	1.05	1.59
40	3.18	2.53
80	7.56	6.22


Lowess normalization
====================
all parameters at default values

#	T1	T2
--------------------
10	5.46	-
20	10.33	-
40	23.36	-
80	49.02	-