Package net.sf.basedb.util.overview.loader

Class ArrayDesignLoader

java.lang.Object

net.sf.basedb.util.overview.loader.AbstractNodeLoader<I>

net.sf.basedb.util.overview.loader.BasicItemNodeLoader<ArrayDesign>

net.sf.basedb.util.overview.loader.ArrayDesignLoader

All Implemented Interfaces:

NodeLoader<ArrayDesign>

public class ArrayDesignLoader
extends BasicItemNodeLoader<ArrayDesign>

Node loader implementation for array designs. Array designs are an endpoint node with the forward-loading direction going to ArrayDesign:s -> ArrayBatch:s. An array design can also be loaded as a property node from a raw bioassay.

Version:

2.10

Author:

Nicklas

Last modified

$Date: 2015-10-01 11:37:58 +0200 (to, 01 okt 2015) $

Field Summary

Fields inherited from class net.sf.basedb.util.overview.loader.BasicItemNodeLoader

ALLOW_ROOT_NODE, allowAsRootNode, DENY_ROOT_NODE, factoryKey, nameGenerator

Constructor Summary

Constructors

Constructor	Description
ArrayDesignLoader()

Method Summary

Modifier and Type	Method	Description
Node	createPropertyNode(DbControl dc, OverviewContext context, Node parentNode)	Create an array design property node from a raw bioassay or root raw bioassay node.
Node	createReverseNode(DbControl dc, OverviewContext context, Node batchNode)	Create a reverse-loading array design node from an array batch node.
protected void	loadForwardChildNodes(DbControl dc, OverviewContext context, Node designNode)	Loads the array batch nodes that has been created with the given design node.
protected void	loadPropertyChildNodes(DbControl dc, OverviewContext context, Node designNode)	Loads property nodes of an array design.

Methods inherited from class net.sf.basedb.util.overview.loader.BasicItemNodeLoader

createItemNode, createRootNode, getNodeFactory, getNodeFactory, getNodeLoader, getNodeLoaderFactory, getNodeNameGenerator, getNodeValidator, getNodeValidatorFactory, postValidateFolder

Methods inherited from class net.sf.basedb.util.overview.loader.AbstractNodeLoader

createForwardNode, loadChildNodes, loadChildNodesOfFolderNode, loadChildNodesOfItemNode, loadReverseChildNodes

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

ArrayDesignLoader

public ArrayDesignLoader()

Method Details

createReverseNode

public Node createReverseNode(DbControl dc,
OverviewContext context,
Node batchNode)

Create a reverse-loading array design node from an array batch node.

Specified by:

createReverseNode in interface NodeLoader<ArrayDesign>

Overrides:

createReverseNode in class AbstractNodeLoader<ArrayDesign>

Parameters:

dc - The DbControl to use for database access

context - The overview context

batchNode - The child node

Returns:

An array design node, or null if the batch doesn't have a design

createPropertyNode

public Node createPropertyNode(DbControl dc,
OverviewContext context,
Node parentNode)

Create an array design property node from a raw bioassay or root raw bioassay node.

Specified by:

createPropertyNode in interface NodeLoader<ArrayDesign>

Overrides:

createPropertyNode in class AbstractNodeLoader<ArrayDesign>

Parameters:

dc - The DbControl to use for database access

context - The overview context

parentNode - The parent node

Returns:

An array design node, or null if the raw bioassay doesn't have a design

loadPropertyChildNodes

protected void loadPropertyChildNodes(DbControl dc,
OverviewContext context,
Node designNode)

Loads property nodes of an array design.

• Annotations: AnnotationLoader.createPropertyNode(DbControl, OverviewContext, Node)
• Data files: DataFileLoader.createPropertyNode(DbControl, OverviewContext, Node)
• Platform: PlatformLoader.createPropertyNode(DbControl, OverviewContext, Node)

Overrides:

loadPropertyChildNodes in class AbstractNodeLoader<ArrayDesign>

loadForwardChildNodes

protected void loadForwardChildNodes(DbControl dc,
OverviewContext context,
Node designNode)

Loads the array batch nodes that has been created with the given design node.

Overrides:

loadForwardChildNodes in class AbstractNodeLoader<ArrayDesign>

See Also:

ArrayBatchLoader.createForwardNode(DbControl, OverviewContext, Node)