net.sf.basedb.clients.migrate
Class ScanTransfer
java.lang.Object
net.sf.basedb.clients.migrate.Manager
net.sf.basedb.clients.migrate.Transfer
net.sf.basedb.clients.migrate.SharedItemTransfer
net.sf.basedb.clients.migrate.CommonItemTransfer
net.sf.basedb.clients.migrate.ScanTransfer
public class ScanTransfer
- extends CommonItemTransfer
This class provides methods for transferring ScanTransfer from base 1 to BASE
2.
- Version:
- 2.0
- Author:
- Gregory, Martin
- Last modified
- $Date: 2008-09-05 17:15:54 +0200 (Fri, 05 Sep 2008) $
Fields inherited from class net.sf.basedb.clients.migrate.Transfer |
BASE2, FROM, itemList, LIMIT, LOCAL_MYSQL_TRANSFER, mapIds, progress, properties, QUICK_TRANSFER, selectOffset, sessionControl, TO |
Methods inherited from class net.sf.basedb.clients.migrate.Transfer |
cleanUpMemory, commit, createItem, dependencyFailure, done, getBase2Id, getBatchSize, getCount, getDependencyStatus, getIdMap, getInt, getProperty, initIdMap, isDone, mapId, newDbControl, readRestorePointData, run, run, runUnBatched, saveItem, setup, startProgress, writeRestorePointData |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
log
private static final Logger log
- Logger for this class
hybridizationT
HybridizationTransfer hybridizationT
hardwareT
HardwareTransfer hardwareT
ScanTransfer
ScanTransfer(UserTransfer userT,
GroupTransfer groupT,
HybridizationTransfer hybridizationT,
HardwareTransfer hardwareT)
- Constructs a new ScanTransfer.
start
public void start()
- Description copied from class:
Transfer
- Starts the actual transfer.
- Specified by:
start
in class Transfer
createItem
protected Scan createItem(DbControl b2c,
ResultSet rs)
throws BaseException,
SQLException
- Creates a
Scan
from the current position in
ResultSet
.
- Overrides:
createItem
in class Transfer
- Parameters:
b2c
- DbControl
used to transfer this itemrs
- ResultSet
containing the data for this item.
- Returns:
Scan
- Throws:
BaseException
- If a new Scan cannot be created.
SQLException
- If current ResultSet position is invalid or number
of columns in the select statement is to low.
getScanById
public Scan getScanById(DbControl dbc,
int base1ScanId)
- Returns a Scan by the given base 1 scan(ImageAcquisition) id.
- Parameters:
dbc
- DbControl
used to get the Scan.base1ScanId
-
- Returns:
Scan
or null if the given scan id does not exsist.