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2.14.2: 2010-02-22 | ||||||||
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Interface Summary | |
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SpotIntensityParser | A spot intensity parser is responsible for parsing and extracting spot intensity data on a row-by-row basis from a BASEfile. |
Class Summary | |
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BaseFileImporter | Imports spot data from a serial or matrix BASEfile. |
BaseFileImporter.RawDataProxy | |
BaseFileImporter.ReporterProxy | |
BaseFileInfo | Collects information about a BASEfile as it gets parsed
by a BaseFileImporter . |
BaseFileInfo.ChildBioAssay | Keeps information about a new child bioassay from the 'assays' section or 'spot' sections. |
BaseFileInfo.SpotSectionInfo | Keeps information about headers and more in a 'spot' section. |
ExtraFloatParser | Parser that is responsible for extracting extra float values from the 'spot' section in a BASEfile. |
FirstPassSectionSpotsParser | Parses a 'spots' section of a BASEfile with bioassay set spot data. |
GenericIntensityParser | Generic spot intensity parser implementation that looks for 'intensity1', ..., 'intensityN' data columns for any number of channels. |
MAParser | Spot intensity parser implementation for 2-channel data that looks for M/A values in the spot data and converts them to ch1/ch2 intensity values. |
SecondPassSectionSpotsParser | The second pass of the 'spots' section extracts spot and extra value data. |
SectionAssaysParser | Parses the 'assays' section of a BASEfile with bioassay set spot data. |
SectionReporterListParser | Parses the 'reporterlist' section of a BASEfile. |
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2.14.2: 2010-02-22 | ||||||||
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