net.sf.basedb.clients.web
Class ExperimentExplorer.AnnotationSummary
java.lang.Object
net.sf.basedb.clients.web.ExperimentExplorer.AnnotationSummary
- Enclosing class:
- ExperimentExplorer
public static class ExperimentExplorer.AnnotationSummary
- extends Object
An annotation summary object keeps track of intensities and other
statistical information based on the annotation group.
- Version:
- 2.0
- Author:
- nicklas
- Last modified
- $Date: 2009-04-30 11:32:26 +0200 (Thu, 30 Apr 2009) $
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
explorer
private final ExperimentExplorer explorer
assayGroups
private final Map<Short,ExperimentExplorer.AnnotationGroup> assayGroups
groups
private final Set<ExperimentExplorer.AnnotationGroup> groups
ExperimentExplorer.AnnotationSummary
private ExperimentExplorer.AnnotationSummary(ExperimentExplorer explorer,
DbControl dc,
AnnotationType annotationType)
getAnnotationGroup
public ExperimentExplorer.AnnotationGroup getAnnotationGroup(short column)
- Get the annotation group for the bioassay with the
give data cube column.
- Parameters:
column
- The data cube column of an bioassay
- Returns:
- An AnnotationGroup object, or null if none is found
getAnnotationGroups
public Set<ExperimentExplorer.AnnotationGroup> getAnnotationGroups()
- Get all annotation groups that was found among the bioassays.
- Returns:
- The annotations groups.