2.10.1: 2009-03-24

net.sf.basedb.clients.migrate
Class ExtractTransfer

java.lang.Object
  extended by net.sf.basedb.clients.migrate.Manager
      extended by net.sf.basedb.clients.migrate.Transfer
          extended by net.sf.basedb.clients.migrate.SharedItemTransfer
              extended by net.sf.basedb.clients.migrate.CommonItemTransfer
                  extended by net.sf.basedb.clients.migrate.MeasuredBioMaterialTransfer
                      extended by net.sf.basedb.clients.migrate.ExtractTransfer

public class ExtractTransfer
extends MeasuredBioMaterialTransfer

Base 1 tables
Extract
Unused columns
addedDate

Version:
2.0
Author:
Gregory
Last modified
$Date: 2008-09-11 22:05:50 +0200 (Thu, 11 Sep 2008) $

Field Summary
private static Logger log
          Logger for this class
private  SampleTransfer sampleT
           
 
Fields inherited from class net.sf.basedb.clients.migrate.CommonItemTransfer
DESCRIPTION, NAME, REMOVED
 
Fields inherited from class net.sf.basedb.clients.migrate.SharedItemTransfer
GID, GROUP_ACCESS, groupT, ID, OWNER, userT, WORLD_ACCESS
 
Fields inherited from class net.sf.basedb.clients.migrate.Transfer
BASE2, FROM, itemList, LIMIT, LOCAL_MYSQL_TRANSFER, mapIds, progress, properties, QUICK_TRANSFER, selectOffset, sessionControl, TO
 
Constructor Summary
ExtractTransfer(UserTransfer userT, GroupTransfer groupT, ProtocolTransfer protocolT, SampleTransfer sampleT)
           
 
Method Summary
protected  Extract createItem(DbControl dc, ResultSet rs)
          Creates an Extract from the current position in ResultSet.
protected  Extract getExtractById(DbControl dbc, int base1ExtractId)
          Returns an extract from the given base1ExtractId.
 void start()
          Starts the actual transfer.
 
Methods inherited from class net.sf.basedb.clients.migrate.MeasuredBioMaterialTransfer
setMeasuredBioMaterialData
 
Methods inherited from class net.sf.basedb.clients.migrate.CommonItemTransfer
setCommonItemData
 
Methods inherited from class net.sf.basedb.clients.migrate.SharedItemTransfer
chmod, chown, getOwner, setSharedItemData
 
Methods inherited from class net.sf.basedb.clients.migrate.Transfer
cleanUpMemory, commit, createItem, dependencyFailure, done, getBase2Id, getBatchSize, getCount, getDependencyStatus, getIdMap, getInt, getProperty, initIdMap, isDone, mapId, newDbControl, readRestorePointData, run, run, runUnBatched, saveItem, setup, startProgress, writeRestorePointData
 
Methods inherited from class net.sf.basedb.clients.migrate.Manager
getPreparedStatements, prepareStatementFromFile, print, printDate, setPreparedStatements, stop
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

sampleT

private final SampleTransfer sampleT

log

private static final Logger log
Logger for this class

Constructor Detail

ExtractTransfer

ExtractTransfer(UserTransfer userT,
                GroupTransfer groupT,
                ProtocolTransfer protocolT,
                SampleTransfer sampleT)
Parameters:
userT - A finished UserTransfer
groupT - A finished GroupTransfer
protocolT - A finished ProtocolTransfer
sampleT - A finished SampleTransfer
Method Detail

start

public void start()
Description copied from class: Transfer
Starts the actual transfer.

Specified by:
start in class Transfer

createItem

protected Extract createItem(DbControl dc,
                             ResultSet rs)
                      throws BaseException,
                             SQLException
Creates an Extract from the current position in ResultSet.

Overrides:
createItem in class Transfer
Parameters:
dc - DbControl used to transfer this item
rs - ResultSet containing the data for this item.
Returns:
Extract
Throws:
BaseException
SQLException - If current ResultSet position is invalid or number of columns in the select statement is to low.

getExtractById

protected Extract getExtractById(DbControl dbc,
                                 int base1ExtractId)
Returns an extract from the given base1ExtractId.

Parameters:
dbc - DbControl use to get the extract.
base1ExtractId -

2.10.1: 2009-03-24