public interface IntensityCalculator
IntensityCalculatorUtil
class to help a plugin calculate intensities from raw data spots. A plugin
must supply an implementation of this interface to be able to use the
IntensityCalculatorUtil.createRootBioAssaySet(DbControl, Experiment, Collection, Job, IntensityCalculator, ProgressReporter)
.
One simple but powerful implementation is available from the IntensityCalculatorUtil.createJepIntensityCalculator(DbControl, RawDataType, String[])
It creates an intensity calculator that parses a string with a mathematical
expression.
Modifier and Type | Method and Description |
---|---|
float[] |
calculateIntensities(RawData rawData)
Calculate intensities from a raw data spot.
|
float[] calculateIntensities(RawData rawData)
rawData
- The raw data object the intensities should
be calculated from