Package net.sf.basedb.util.listable
Class ExtractToParentExtractTransformer
- java.lang.Object
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- net.sf.basedb.util.listable.AbstractSourceItemTransformer
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- net.sf.basedb.util.listable.ExtractToParentExtractTransformer
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- All Implemented Interfaces:
SourceItemTransformer
public class ExtractToParentExtractTransformer extends AbstractSourceItemTransformer
Source item transformer implementation that transform extract items to their parent extract items. From the given set of extract ID:s the transformer will recursively load as many parent extracts as possible. The source items may optionally be included in the target set.- Since:
- 3.5
- Author:
- Nicklas
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Field Summary
Fields Modifier and Type Field Description private CollectExtracts
collectedExtracts
private boolean
includeSourcesInTarget
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Constructor Summary
Constructors Constructor Description ExtractToParentExtractTransformer(boolean includeSourcesInTarget)
Create a new extract to parent extract transformer.ExtractToParentExtractTransformer(boolean includeSourcesInTarget, CollectExtracts collectedExtracts)
Create a new extract to parent extract transformer that is considering extracts collected on downstream derived and raw bioassays.
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description Set<Integer>
transform(TransformContext context, Set<Integer> source)
Transform the given set of source item ID:s into a set of target item ID:s-
Methods inherited from class net.sf.basedb.util.listable.AbstractSourceItemTransformer
getSourceItemType, getTargetItemType, safeIdList
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Field Detail
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includeSourcesInTarget
private final boolean includeSourcesInTarget
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collectedExtracts
private CollectExtracts collectedExtracts
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Constructor Detail
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ExtractToParentExtractTransformer
public ExtractToParentExtractTransformer(boolean includeSourcesInTarget)
Create a new extract to parent extract transformer.- Parameters:
includeSourcesInTarget
- TRUE to include the source items in the target
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ExtractToParentExtractTransformer
public ExtractToParentExtractTransformer(boolean includeSourcesInTarget, CollectExtracts collectedExtracts)
Create a new extract to parent extract transformer that is considering extracts collected on downstream derived and raw bioassays.- Parameters:
includeSourcesInTarget
- TRUE to include the source items in the targetcollectedExtracts
- Information about extracts found on downstream derived and raw bioassays
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Method Detail
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transform
public Set<Integer> transform(TransformContext context, Set<Integer> source)
Description copied from interface:SourceItemTransformer
Transform the given set of source item ID:s into a set of target item ID:s
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